Gene Bcenmc03_5722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5722 
Symbol 
ID6128527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2878899 
End bp2880458 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content66% 
IMG OID641652807 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001779334 
Protein GI170738074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.102537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.245407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTC CCTCGTCTTC AGGCCCGCTG TCGGGCGGCC GGCTCGTCAT CGGCACGATC 
GCGGTCTCGC TGGCGATGTT CATGAACGTG CTCGATTCGT CGATCGCGAA CGTCGCGATC
CCGACGATCT CGGGCGACCT CGGCGTGTCG GTCGACGAAG GCACGTGGGT GATCACGATC
TTCGCGGCGG CGAACGCGGT GTCGATTCCG CTGACCGGCT GGCTCACGCA GCGCTTCGGC
CAGGTACGCC TGTTCGTCAC GTCGATCCTG CTGTTCGTGT TCGCGTCGTG GCTGTGCGGG
ATCGCACCGA ACCTGCCGAC GCTGCTCGCC GCGCGAATCC TGCAAGGTGC GGTGGCGGGG
CCGCTCGCGC CGTTGTCGCA GGCGCTGCTG CTCGGCGCGT GGCCACGGCA GAAGTCGTCG
ACGGCGCTCG CGCTGTGGTC GATGACGGCG CTCGTCGGGC CGATCGCGGG GCCGTCGCTC
GGCGGCTGGA TCACGTACGA CTACAACTGG TCGTGGATCT TCTACATCAA CATTCCGGTC
GGCTTCTTCG CGGCGGCCGT CACGTGGTTC GTGTTCCGCG ATCGCGAATC CGCCACGCGC
CGCCTGCCGA TCGACACGGT CGGCCTGCTG CTGCTCGTGC TGTGGGTCGC CTCGCTACAG
ATCATGCTCG ACAAGGGCAA GGATCTCGAC TGGTTCAACT CGCCCGTCGT CGTCGCGCTG
GGCATCGTCG CGCTGATCGG CTTCGCGTTC TTCCTCGTGT GGGAACTGAA CGAAGCCAAT
CCGATCGTCG ACCTGCGCCT CTTCACGCAG CGCAATTTCG CGGGCGGCAC GATCGCGATC
TCCGTCGCGT ACGGGATGTT CTTCGGCACG CTCGTGCTGC TGCCGCAATG GATGCAGGGC
TATCTCGGCT ACCGCGCGGT CGATTCGGGG CTCGCCACCG CGCCGCTCGG GGTGTTCGCG
ATCCTGCTCA CGCCGGTCAT GGGGCGCCTG CTGCCGCGCA CCGATCCGCG TTATATCGCG
ACGCTCGCAT TCGTCGGCTT CGCGGTCGTG TTCATGATGC GCACGACCTT CTACACCGAC
GTGTCGCACT GGGATCTGGT GCTGCCGACG CTGCTGCAAG GCATTCCGAT GGCGATGTTC
TTCGTGCCGC TGACGTCGAT CATCCTGTCC GGGCTGCCGC CGGAAAAGAT TCCGGCGGCA
GCCGGCCTGT CGAATTTCGG CCGCACGTTC TGCGGTGCGG TGGGCACGTC GCTGATCAGC
AATGCGTGGA ACGACCGCAC GATCCTGCAC CACGTGCGGC TCACCGAACA GGCGAGCGTC
ACCAATCCGG TCTTCACGCA GCAGCTCGAC ACGACCCGTT CGCTGCTGCA CCTGAGCCCC
GATTCGGCGC TTGCGTTCTT CAATGCGTCG GTCGATTCGC AGGCGGCCGT GATGGGCTTG
AACGACATCT TCTACGTGTC GGCGATCATC TTCATCGCGA TCATTCCACT CATCTGGATC
ACGAAACCGG CGCGCTCGGG TGGCGGCGAT GCCGATGCGG CGGCGGCCGG CGCGCATTGA
 
Protein sequence
MSSPSSSGPL SGGRLVIGTI AVSLAMFMNV LDSSIANVAI PTISGDLGVS VDEGTWVITI 
FAAANAVSIP LTGWLTQRFG QVRLFVTSIL LFVFASWLCG IAPNLPTLLA ARILQGAVAG
PLAPLSQALL LGAWPRQKSS TALALWSMTA LVGPIAGPSL GGWITYDYNW SWIFYINIPV
GFFAAAVTWF VFRDRESATR RLPIDTVGLL LLVLWVASLQ IMLDKGKDLD WFNSPVVVAL
GIVALIGFAF FLVWELNEAN PIVDLRLFTQ RNFAGGTIAI SVAYGMFFGT LVLLPQWMQG
YLGYRAVDSG LATAPLGVFA ILLTPVMGRL LPRTDPRYIA TLAFVGFAVV FMMRTTFYTD
VSHWDLVLPT LLQGIPMAMF FVPLTSIILS GLPPEKIPAA AGLSNFGRTF CGAVGTSLIS
NAWNDRTILH HVRLTEQASV TNPVFTQQLD TTRSLLHLSP DSALAFFNAS VDSQAAVMGL
NDIFYVSAII FIAIIPLIWI TKPARSGGGD ADAAAAGAH