| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5710 |
|---|
| Symbol | |
|---|
| ID | 6128515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2865185 |
|---|
| End bp | 2865961 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641652795 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001779322 |
|---|
| Protein GI | 170738062 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0410185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG TCGATCACGT ATCGATCCGT TTCCCGACCC GCACGGGTCA CGTCGACGCC
GTGCGCGACG CGAGCTTCGC GGTGCGCGAC GGCGAAGTGT TCGGGCTGGT CGGCGAATCG
GGCTCCGGCA AGTCGACGCT GCTGCGTGCG CTGACGGGCC TCGTGCCGCT CGCGTCCGGC
AGCCTGTCGA TCGATGGCCG TCCGGTCGGC GGCACGCCCG ATCGCGCGTT CCGCCGTCAC
GTGCAGATGG TGTTCCAGGA CCCGTACGCG TCGCTGCATC CGCGCTTCAC GGTCGACCAG
ACGCTGCGCG AGCCGCTGTC GATCCATGCG ATCGGCGACG CCGATGCGCG GATCGCCCGC
GCGCTCGCCG AGGTCGGCCT CGGCCCCGCG TTCCGCTTCC GCTACCCGCA CCAGTTGTCG
GGCGGCCAGC GGCAGCGCGT GGCGATCGCG CGCGCGCTGA TCGTCGAGCC GCGCGTGCTG
CTGCTCGACG AGCCGACGTC CGCGCTCGAC GTATCGGTGC AGGCCGAGAT CCTGAACCTG
CTGCGCCGCC TGCATCGCGA ACGCAACCTG ACGATGATCC TCGTCAGCCA CAACCTCGCG
GTGATCGGCT TCCTGTGCCA GCGCGTCGCG GTGATGCAGC ACGGCGAGAT CGTCGAGCAG
TTGCGGATCG AGGACGTGCG GGCCGGGCAG GTCGCACGCG ACTACACGCG TACGCTGCTG
AACGCGACCG AAGGCTATCG CCGCCTCGAC CCGGTTGCCG ACGCGCCTGC CAAGTGA
|
|---|
| Protein sequence | MIDVDHVSIR FPTRTGHVDA VRDASFAVRD GEVFGLVGES GSGKSTLLRA LTGLVPLASG
SLSIDGRPVG GTPDRAFRRH VQMVFQDPYA SLHPRFTVDQ TLREPLSIHA IGDADARIAR
ALAEVGLGPA FRFRYPHQLS GGQRQRVAIA RALIVEPRVL LLDEPTSALD VSVQAEILNL
LRRLHRERNL TMILVSHNLA VIGFLCQRVA VMQHGEIVEQ LRIEDVRAGQ VARDYTRTLL
NATEGYRRLD PVADAPAK
|
|---|
| |