| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5588 |
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| Symbol | |
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| ID | 6128396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2731699 |
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| End bp | 2732778 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641652676 |
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| Product | porin |
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| Protein accession | YP_001779203 |
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| Protein GI | 170737943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00406297 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCAAGC ATGCGGTAGC AGCAGCAGTC ATCGGGATGG GCGCCGCGTC GGGCGCGTGG
GCGCAGAGCA GCGTGGTGCT ATACGGCAGC ATGGATGCGG GCGTCGCATA CGTGAACAAC
GTCGGCGGCC ACGCGAAGTG GGCGATGATC CAGGGCAATA CGCAGCCCGA CCGGTGGGGC
CTGAAGGGCA AGGAAGATCT CGGCGACGGA CTGTCGGCGA TCTTCCAGCT GGAAAACGGC
TTCTATACGA ACAACGGCCA GTTCGCGACG GCGAACACGA TCTGGAACCG CGCGGCGTTC
GTCGGCCTCA GCGCCGAGCG CTACGGTACG CTGACGCTCG GCCGCCAGAC GCCGCTGTCG
TTCGACTATC TCGATCCGCT CAGCACCGCG TATCTCGCGC TGAGCTGGTA CGCGTTCCAT
CCCGGCAACA TCGACGGGCT CGCCGCGACC GGCAACGTGC CGTACAACAA TTCGATCAAG
TACCGTTCGC CGACCTTCGC GGGTTTCTCC GCCGCGGCGA CGCTCGCGCT CGGCAACACG
ACGAACTTCT CGACCGGCAA ATCGGTCGGC GTCGCGCTGA ACTATGCGAA CGGGCCGTTC
AAGGCGTCGG CCGTCTACTC GAACGAGCAC GACCGCTCGC TGCTGATCAG CCAGACGGGT
ATCACGTCGT TCCAGGGGCA AAACACCGCG AACGGTTATC TCGCCAGCAA GGTCGAGAAC
ATCGGCGCGG GCGCGTCGTA CCAGATCGGC GACTTCCTCG TACACGGCCT CTACACGCGC
GTGAAGATGC AGTCGAACGG GTTTTCCGAC ACGTTCCAGA GCTACGACGC GGGCGTGAAC
TACCGCAGCA GCGCGTTCAA CACGATCGCG GGCGGCGCGG CGACCACGAC GCTGGCCGGC
CGCCGCTGGA CGCAGGTCGA ACTCGGCGAC ATCTACGCGT TGTCGAAGCG CACGCAGCTG
TATGCGAACG TGCTTTATGA ACACGGCTCG GGCGGCGCGA AGGCCGCGTT CTTCACGGCC
GGCGTGTCGA GCACCGCGAA CCAGGTGATC GTGCTGACCG GCATTCATCA CTCGTTCTGA
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| Protein sequence | MVKHAVAAAV IGMGAASGAW AQSSVVLYGS MDAGVAYVNN VGGHAKWAMI QGNTQPDRWG
LKGKEDLGDG LSAIFQLENG FYTNNGQFAT ANTIWNRAAF VGLSAERYGT LTLGRQTPLS
FDYLDPLSTA YLALSWYAFH PGNIDGLAAT GNVPYNNSIK YRSPTFAGFS AAATLALGNT
TNFSTGKSVG VALNYANGPF KASAVYSNEH DRSLLISQTG ITSFQGQNTA NGYLASKVEN
IGAGASYQIG DFLVHGLYTR VKMQSNGFSD TFQSYDAGVN YRSSAFNTIA GGAATTTLAG
RRWTQVELGD IYALSKRTQL YANVLYEHGS GGAKAAFFTA GVSSTANQVI VLTGIHHSF
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