Gene Bcenmc03_5587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5587 
Symbol 
ID6128395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2730695 
End bp2731591 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content68% 
IMG OID641652675 
ProductIclR family transcriptional regulator 
Protein accessionYP_001779202 
Protein GI170737942 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00152901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCAAGA CAACGATGAG CGATGCACCT GAGCCGGCGG TGCCTGGCGA CGACGAGTCG 
TCGGGCGGCG GCGCTTCGTC CTATCTGGTG CCGGGGCTCG AACGCGGGCT GCGGATCCTC
GCCGAATTCT CCGCGCGCGA GCCCGTGCTC GGCGCACCCG AGCTGTCCAA GCGCATCGGC
ATTCCGCGCA CGACCACGTT CCGCCTGCTG CAGACGCTCG AGGCGCTCGG TTTTCTCGAA
CGCGTGAACG GCGACCGCTA TTTCCGGCTC GGCGTCGGCG TGTTGCGGCT CGGCTTCGAA
TACCTGAATT CGCTCGAGCT GACCGATCTC GGCACGCCCG TGCTCGAACG GCTGCGCGAT
GCGACCGGCC TGTCGACGCA CCTGCTGATC CGCGACCAGC GCGACGTGGT GTTCGTCGCG
AAGGCGCAAA GCAATGCGTC GATGTTCGGT TCGGTGAAGG TGCACGTCGG CACGCGCCTG
CCCGCGCATG CGACCGTGCA CGGCCACGTG CTGATGGGCG ACCTGACGCG CGATGCGCTG
CGACAGCTTT ATCCGGAGAA GAAACTCGAA CAGTTCACCG AGCGCACGCC CGGCACCGTC
GACGAGCTGT ACGAGCGCGT GCGTCATTAC GCGCGGCTCG GCTATGCGGT CAGCGAGGCG
GCGTTCGAGA GCGGCATTTC CGCGGTGACG GCGCCCGTGC GCGATCATTC GGGCTCGATC
GTCGCGGCGA TCACCGCGAC GGTGCCGCGC TCGGAGATCG GCGAGGCTGG CGAGAAGGAG
CGGCTCGTCG AAGCGGTGTG CGGCGCGGCG GTCGACCTGT CGCAACGGCT GAACTATCGT
CCGCTCGAAA GCGACCCGAC GTTCGCGCAT GCGCGCCACA AGGTCGCGAT GTTCTGA
 
Protein sequence
MVKTTMSDAP EPAVPGDDES SGGGASSYLV PGLERGLRIL AEFSAREPVL GAPELSKRIG 
IPRTTTFRLL QTLEALGFLE RVNGDRYFRL GVGVLRLGFE YLNSLELTDL GTPVLERLRD
ATGLSTHLLI RDQRDVVFVA KAQSNASMFG SVKVHVGTRL PAHATVHGHV LMGDLTRDAL
RQLYPEKKLE QFTERTPGTV DELYERVRHY ARLGYAVSEA AFESGISAVT APVRDHSGSI
VAAITATVPR SEIGEAGEKE RLVEAVCGAA VDLSQRLNYR PLESDPTFAH ARHKVAMF