Gene Bcenmc03_5482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5482 
Symbol 
ID6128292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2622906 
End bp2623715 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content72% 
IMG OID641652572 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001779099 
Protein GI170737839 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.502253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG TGCCGGGCAG CGGTCGCCTG CGGGCGGATT TCGGCGGCCG TGTCGTGCTC 
GTCACGGGCG CCGCGCAAGG AATCGGCGCG GCGATCGCGC GCCGTTTCGC AGAATCCGAC
GCGTTCGTCG CCGTGGCCGA CCTGAACGGC GACGCGGCAG CCGCGCAGGC CGACGCGCTG
GCCAGCGCGG GCGGCGACGC ACGCGCGTAT CGGGTCGATG CCGCGAGCCG GGGCGACCTG
GATGCGCTCG TCGCGGCAGT CGAGCGCGAC GGCGGCCGAC TCGATGTCGT GATCCACAAT
GCCGCGTATT TTCCGTTGAC GCCGTTCATG CAGATCGACG AGCCGACGCT CGATCGCACG
CTGTCGGTCA ACCTGTCGGC GCTGTTCTGG CTCGCGCAGG CCGCGTTGCC GGCATTCCAG
CGGGCGGGGG CCGGCAGGCT GCTCGTCACG TCGTCGGTGA CGGGGCCGCG CGTCGTCTAT
CCGGGGCTTG CGCATTACGC GGCGTCGAAG GCCGGCGTGA ACGGCTTCAT CCGGGCGGCG
GCGCTGGAGC TGGCGCGCCG CAACGTGACG GTCAACGGCG TCGAACCGGG GATGATTCGC
ACGCCGGCGG CCGGCAATCT CGGCGACGCG TCGGTCGCGG CGCAGATCGC GCACGACATT
CCGCTCGCGC GGATGGGCGA GCCGGAGGAC ATCGCGAACG CGATGCTGTT TCTCGCGTCG
GCCGACGCGG CGTACATCAC CGGGCAGACG ATCGTCGTCG ATGGCGGGGC GACTTTGCCG
GAGAGCGGGG CGGTGCTCGG AGAACGATAG
 
Protein sequence
MTAVPGSGRL RADFGGRVVL VTGAAQGIGA AIARRFAESD AFVAVADLNG DAAAAQADAL 
ASAGGDARAY RVDAASRGDL DALVAAVERD GGRLDVVIHN AAYFPLTPFM QIDEPTLDRT
LSVNLSALFW LAQAALPAFQ RAGAGRLLVT SSVTGPRVVY PGLAHYAASK AGVNGFIRAA
ALELARRNVT VNGVEPGMIR TPAAGNLGDA SVAAQIAHDI PLARMGEPED IANAMLFLAS
ADAAYITGQT IVVDGGATLP ESGAVLGER