| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5422 |
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| Symbol | |
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| ID | 6128232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2546118 |
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| End bp | 2547599 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641652512 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001779039 |
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| Protein GI | 170737779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.585602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.389505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC TCTCTTCCGT CCCGCGCAAG CTTCGCGTCG ATGCGCTCGC CGCGCTGCTG
CTGTCGCTCG CCGCCGCTTC CGCATTCGCG CAAGCGTCGG CTCCCGCCAC CGAACCGGCG
GCCGGCACGA ACGATGCCGC CACCCCCGCA CAACCGGCCG CCGATGCTGC CGCGCCCGCT
CCCACCGGCT TGTGGGAACG GTCGAACCTG CTCGGCAACA TGGGCGGCCT GCGCGACGTG
CTCGACGAAC ACGGCGTCAC GCTGAGCCTG CAGGAAACCA GCGAGTACCT GTACAACACG
TCCGGCGGCA CAGGGCGCGG CGGTGCGTAC CAGGGGCTCA CGCAATTCGG TTTCAACGTC
GACACCGGCA AGGCGATCGG CCTGCCGGGC GGCACGTTCA ACGTGTCGGG GCTGCAGATC
CACGGCACCA ACCTCACGCA GCGCTACCTG CAGACGCTGC AGACCGCGAC CGGCATCGAG
GCCAATTCGA CCACGCGCCT GTGGGAGCTC TGGTACCAGC AGTCGCTGCT CGACGGCAAG
GTCGACGTGA AAGTCGGCCA GCAGAGCGTC GACCAGGAAT TCATGGTGAG CCAGAACGCA
GCGACGTTCA TGAACGCGAC GTTCGGCTGG CCCGTGCTGC CGTCCACCGA TCTGCCGTCC
GGCGGCCCTG CGTATCCGCT GTCGTCGCTC GGCGTGCGGC TGCGCGTGAA GCCGGCCGAC
GCGTGGACCG CGATGGTCGG CGTGTTCGAC GGCAACCCGG CCGGCCGCAG CGACGGTGAC
GCGCAGGTGC TGAACGCGCA CGGCACCAAT TTCAACCTGC GCAGCGGCGC ATTCGTGATC
GGCGAAGTGC AGTACGCGCT GAACGCGCCG CCGGCCGACC CGAAGGCCCC GCAGCCGGCC
GGCCTGCCCG GCACCTACAA GCTCGGCTTC TGGTATCACT CGCAGCACGC GAACGATCCG
CGCTACGGCA CCGACGGGTT GTCGCTCGCC GATCCGGCCA GCAACGGCAC GCCCGCCACG
CATCGGGGCA ACTACGGGTT CTATGCGGTC GCGGACCAGA TGGTGTGGCG GCCGTCCGCC
GACAGCCCGC GCTCGGTCGG CGTGTTCGCG CGCGTGATGG GCTCGCCGGG CGACCGCAAT
CTCGTCGATT TCGCGGCCAA CGCGGGCGTG ACGCTGAAGG CCCCGTTCGT CGGGCGCGAC
AACGACGTCG CCGGCATCGC GATCGGCTAC GCGAAGATCG GTTCGCATGC GCGCGGCCTC
GACGGCGACA CCGGCGCGTA CACGACGCCC GGCTATCCGG TACGCCGCGC GGAGACGGTC
ATCGAGGCGA CCTACCAGTA CCAGGTCGCG CCGTGGTGGC AGGTGCAGGC CGACCTGCAG
CACTTCTTCC GTCCGGGCGG CGGCATCCCG AACCCGAACG CGGCCGGCGC GCGCATCGGC
GACGAAACGG TGGTCGGCGT GCGCACGACG ATCACGTTCT GA
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| Protein sequence | MKQLSSVPRK LRVDALAALL LSLAAASAFA QASAPATEPA AGTNDAATPA QPAADAAAPA
PTGLWERSNL LGNMGGLRDV LDEHGVTLSL QETSEYLYNT SGGTGRGGAY QGLTQFGFNV
DTGKAIGLPG GTFNVSGLQI HGTNLTQRYL QTLQTATGIE ANSTTRLWEL WYQQSLLDGK
VDVKVGQQSV DQEFMVSQNA ATFMNATFGW PVLPSTDLPS GGPAYPLSSL GVRLRVKPAD
AWTAMVGVFD GNPAGRSDGD AQVLNAHGTN FNLRSGAFVI GEVQYALNAP PADPKAPQPA
GLPGTYKLGF WYHSQHANDP RYGTDGLSLA DPASNGTPAT HRGNYGFYAV ADQMVWRPSA
DSPRSVGVFA RVMGSPGDRN LVDFAANAGV TLKAPFVGRD NDVAGIAIGY AKIGSHARGL
DGDTGAYTTP GYPVRRAETV IEATYQYQVA PWWQVQADLQ HFFRPGGGIP NPNAAGARIG
DETVVGVRTT ITF
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