Gene Bcenmc03_5349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5349 
Symbol 
ID6128159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2465525 
End bp2466235 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641652439 
Producttwo component transcriptional regulator 
Protein accessionYP_001778966 
Protein GI170737706 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.656877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0838777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTC GCATCCTGCT CGTCGAAGAC GACACCCGCC TGTCCACGCT GATCGCCGGC 
TACCTGCGCA AGAACGACTA TGAAGTCGAC ACCGTGCTGC ATGGTGACGC CGCGGTGCCG
GCGATCCTGT CCATTCGTCC CGATCTCGTG ATCCTCGACG TGAACCTGCC GGGCAAGGAC
GGCTTCGAAA TCTGCCGCGA GGCGCGCAAG CAGTACGACG GCGTGATCAT CATGGTGACG
GCGCGCGACG AACCGTTCGA CGAGCTGCTC GGCCTCGAAT TCGGCGCGGA CGACTACGTG
CACAAGCCGG TCGAGCCGCG CATCCTGCTC GCGCGGATCA AGGCGCAACT GCGCCGTGCG
CCCGCGCGCG CGGCCGAGAG CACCGCGCCG CAGCCGGAGC GCTACGCGTT CGGCAAGTTC
TCGATCGACC GCACCGACCG CACCGTCGTG CTGCCCGACG GCAGCACGCC CGATCTGACG
TCGGCCGAAT TCGACCTGCT GTGGGCGCTG GTGTGTCATG CGGGCGAAGT CGTCAGCCGC
GACGATCTGA TGCTGCAGTT GCGCGGCGTC GAATTCGACG GCCTCGACCG CACGATCGAC
GGGCGCATCT CGAAGCTGCG CCGCAAGCTG CGCGACGACG CGAGCAACCC GCAGCGGATC
AAGACGATCC GCAGCAAGGG TTATCAATTC AGCAAGCACG CGTGGGAATG A
 
Protein sequence
MSFRILLVED DTRLSTLIAG YLRKNDYEVD TVLHGDAAVP AILSIRPDLV ILDVNLPGKD 
GFEICREARK QYDGVIIMVT ARDEPFDELL GLEFGADDYV HKPVEPRILL ARIKAQLRRA
PARAAESTAP QPERYAFGKF SIDRTDRTVV LPDGSTPDLT SAEFDLLWAL VCHAGEVVSR
DDLMLQLRGV EFDGLDRTID GRISKLRRKL RDDASNPQRI KTIRSKGYQF SKHAWE