Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5332 |
Symbol | |
ID | 6128142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2449143 |
End bp | 2451188 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652422 |
Product | ABC transporter related |
Protein accession | YP_001778949 |
Protein GI | 170737689 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0305255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGC CCCTGCTGAA ACTCGCCGCC GTCACGCGAC GCTTTCCGGC CGGCGACAAG GACGTCGTCG TGCTGAACAA CGTCAACCTG TCGATCGGCG CGGGCGAGAT CGTCGCGATC GTCGGCGCGT CGGGCTCCGG CAAGTCGACG CTGATGAACA TCCTCGGCTG CCTCGATCAT CCGAGCGAAG GCACGTACAC GGTCGGCGGA CGTGACACGC ACATGCTCGA CAGCGACGAA CTCGCGCAGC TGCGCCGCGA GCACTTCGGC TTCGTGTTCC AGCGCTATCA CCTGCTGCCG CACGTCGACG CGGTCGCGAA CCTCGAAATG CCGGCGATCT ACGCGGGCAC CCCGCGCGCC GATCGGCACG CCCGCGCCCG CGAACTGCTC GCGCGCCTCG GGCTCGCGGA TCGCGCGCAT CACCGGCCCG GCCAACTGTC CGGCGGCCAG CAGCAGCGCG TGAGCATCGC GCGCGCGCTG ATGAACGGCG GCCAGGTGAT CCTCGCGGAC GAACCGACCG GCGCGCTCGA CACGAAAAGC GGCCAGGACG TGATCCGCAT CCTGCACGAG CTGAACGCGC TCGGCCATAC GATCGTGATC GTCACGCACG ACAAGGCCGT GGCGCGCCAT GCGCGGCGCA TCATCGAGAT CAGCGACGGC GAGATCGTCG CGGACCGGCC GAACCGCCAC TACGCGGAGG CACTCGCGGA AGTGGGCGTC GGCGCGGCCG CAACGACGGA AACGGCAGCC GACACGCGGT CCGCGCCGGC TTCCGGCGAC GCACCGCCGC CCGCCAATAA CGATACCGCC GCCGATCCCG CCCCCCGCGC CCGACGCTTC GCCGCCGGCA CCGGCCGTTT CGCCGAAGCA TGCCGGATGG CGTGGATCGC GCTCGTGTCG CACCGGCTGC GCACGCTGCT GACGATGCTC GGCATCATCA TCGGCATTAC GTCGGTCGTG TCGATCGTCG CGGTCGGCGA AGGCGCGAAG CGCTACATGC TCGAAGAAAT CGGCAGCATC GGCACCAATA CGATCAGCCT CTATCCGGGC TCCGACTGGG GCGACAGCCG CGCGGACACG ATCCAGACGC TCGTGCCCGC CGACGTCGCC GCGCTCGCCG AGCAGCCGTA CGTCGACAGC GCGACGCCCG AAACGTCGCG CACGCTGCTG CTGCGCTACC GCAACGTCGA CGTCCACGCG CTCGTGAGCG GCGTCGGCGA CAGCTACTTC CAGACGCGCG GAATGCGCTT CGCGCTCGGC GTCCCGTTCG ACGACGATGC GGTGCGCCGC CAGGCGCAAG TGGCCGTGAT CGACCAGAAC ACGCGCCGCA AGCTGTTCGG CGCGACGCGC AATCCGGTCG GCGAAGCGAT CCTGGTCGAC AACGTGCCGT GCGTCGTGAT CGGTGTGACC GCCGACAAGA AGAGCGCGTT CGGCAGCGTG AAGAGCCTGA ACGTGTGGGT GCCGTACACG ACCGCGAGCG GGCGCCTGTT CGGCCAGCGC TATCTCGACA GCATCACCGT GCGCGTGCGC GACGGGCAGC CGAGCGCCGC CGCCGAGAAA AGCCTCGAGA AGCTGATGAT CCAGCGCCAC GGCCGCAAGG ACTTCTTCAC GTACAACATG GACAGCGTGG TCAAGACCGT CGAGAAGACC GGCCAGTCAC TCACACTGCT GCTGTCGCTG ATCGCGGTGA TCTCGCTCGT GGTCGGCGGG ATCGGCGTGA TGAACATCAT GCTGGTGTCG GTCACCGAGC GCACGCGCGA GATCGGCATC CGGATGGCGG TCGGTGCGCG CCAGTCCGAC ATCCTGCAGC AGTTCCTCGT CGAGGCCGTG CTCGTCTGCC TGCTCGGCGG CACGATCGGC ATCGCGCTGT CGTTCGGGCT CGGCGCGCTG TTCTCGGTGT TCGTCGCGCA GTGGAAGATG GTGTTCTCGG CCGGCGCGAT CGTGACGGCG TTCGTGTGCT CGACGCTCAC CGGCGTGATT TTCGGCTTCA TGCCCGCGCG CAACGCGTCG CGGCTCGACC CGATCGATGC GCTCGCGCGC GACTGA
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Protein sequence | MRQPLLKLAA VTRRFPAGDK DVVVLNNVNL SIGAGEIVAI VGASGSGKST LMNILGCLDH PSEGTYTVGG RDTHMLDSDE LAQLRREHFG FVFQRYHLLP HVDAVANLEM PAIYAGTPRA DRHARARELL ARLGLADRAH HRPGQLSGGQ QQRVSIARAL MNGGQVILAD EPTGALDTKS GQDVIRILHE LNALGHTIVI VTHDKAVARH ARRIIEISDG EIVADRPNRH YAEALAEVGV GAAATTETAA DTRSAPASGD APPPANNDTA ADPAPRARRF AAGTGRFAEA CRMAWIALVS HRLRTLLTML GIIIGITSVV SIVAVGEGAK RYMLEEIGSI GTNTISLYPG SDWGDSRADT IQTLVPADVA ALAEQPYVDS ATPETSRTLL LRYRNVDVHA LVSGVGDSYF QTRGMRFALG VPFDDDAVRR QAQVAVIDQN TRRKLFGATR NPVGEAILVD NVPCVVIGVT ADKKSAFGSV KSLNVWVPYT TASGRLFGQR YLDSITVRVR DGQPSAAAEK SLEKLMIQRH GRKDFFTYNM DSVVKTVEKT GQSLTLLLSL IAVISLVVGG IGVMNIMLVS VTERTREIGI RMAVGARQSD ILQQFLVEAV LVCLLGGTIG IALSFGLGAL FSVFVAQWKM VFSAGAIVTA FVCSTLTGVI FGFMPARNAS RLDPIDALAR D
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