Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5325 |
Symbol | |
ID | 6128135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2440622 |
End bp | 2442151 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652415 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_001778942 |
Protein GI | 170737682 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000685886 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0298656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGA ATCCGACGCC CCGCACGGGG CAAGACGTGC CGACGGTCAA GCTGCTGATC GACGGCGCCT TCGTCGAGTC CACCACCAGC GAGTGGCGCG ACATCGTCAA CCCGGCGACG CAGCAGGTGC TCGCGCGCGT GCCGTTCGCG ACCGTCGCGG AAGTCGACGC GGCCGTGCAG GCCGCGCACG CCGCGTATGC GACGTGGAAG AACACGCCGA TCGCCGCGCG CATGCGCATC ATGCTGAAGT TCCAGGATCT GGTGCGCGCG AACCAGCAGC GCATCGCGAA GACGCTGACG GCTGAACAGG GCAAGACGAT TCCCGACGCC GAAGGCGACA TCTTCCGCGG CCTCGAAGTG GTCGAGCACG CATGCTCGAT CGGCACGCTG CAGCTTGGCG AATTCGCGGA GAACGTCGCG GGCGGCGTCG ACACCTACAC GCTGCGCCAG CCGCTCGGCG TGTGCGCGGG CATCACGCCG TTCAATTTCC CCGCGATGAT TCCGCTGTGG ATGTTCCCGA TGGCGATCGT GTGCGGCAAC ACGTTCGTGC TGAAGCCGTC GGAGCAGGAC CCGATGTCGA CGATGGAACT CGTCGAGCTC GCGCTCGAAG CCGGCGTACC GAAAGGCGTG CTGAATGTCG TGCACGGCGG CAAGGAAGTC GTCGACGCGA TCTGCACGCA TCCGCTCGTG AAGGCGATCT CGTTCGTCGG TTCGACCGCC GTCGGCACGC ACGTGTACAA CCTCGGCAGC CAGCACGGCA AGCGCGTGCA GTCGATGATG GGCGCGAAGA ACCACGCGAT CGTACTGCCC GACGCGAATC GCGAGCAGGC GATCAATGCG CTCGTCGGCG CGGGCTTCGG CGCGGCCGGC CAGCGCTGCA TGGCGACGTC CGTCGCGGTG CTGGTGGGCC AGGCGCGCGA ATGGCTGCCC GACCTCGTCG CGAAGGCGAA GACGCTGAAG GTCAACGCGG GCTCGGAAGC GGGCACCGAC GTCGGGCCGG TCGTGTCGCG CGGTGCGAAG GCGCGGATTC TGTCGCTGAT CGACATGGGC ATCAAGGAAG GCGCGAAGCT CGAACTCGAC GGCCGCGACG TGAAGGTCGC CGGCTTCGAG GAAGGCAACT TCATCGGGCC GACGATCTTC TCCGGCGTGA AAACCGACAT GACGATCTAC ACGCATGAAA TCTTCGGGCC CGTGCTGGTC GTGATGGAAG TCGACACGCT CGACGAAGCG ATCGCGCTCG TCAACGCGAA CCCGATGGGC AACGGCGTGG GCATCTTCAC GCAGAGCGGC GCGGCGGCAC GCAAGTTCCA GAGCGAGATC GACGTTGGCC AGGTCGGCAT CAACATCCCG ATTCCGGTGC CCGTGCCGTT CTTCAGCTTT ACCGGTTCGC GCGGCTCGAA GCTCGGCGAC CTCGGCCCGT ACGGCAAGCA GGTCGTGCAG TTCTACACGC AGACCAAGAC GGTCACCGCG CGCTGGTTCG ACGACGACAC GACGGCCGGC CCGGTGAACA CGACGATCCG GCTGCATTGA
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Protein sequence | MNANPTPRTG QDVPTVKLLI DGAFVESTTS EWRDIVNPAT QQVLARVPFA TVAEVDAAVQ AAHAAYATWK NTPIAARMRI MLKFQDLVRA NQQRIAKTLT AEQGKTIPDA EGDIFRGLEV VEHACSIGTL QLGEFAENVA GGVDTYTLRQ PLGVCAGITP FNFPAMIPLW MFPMAIVCGN TFVLKPSEQD PMSTMELVEL ALEAGVPKGV LNVVHGGKEV VDAICTHPLV KAISFVGSTA VGTHVYNLGS QHGKRVQSMM GAKNHAIVLP DANREQAINA LVGAGFGAAG QRCMATSVAV LVGQAREWLP DLVAKAKTLK VNAGSEAGTD VGPVVSRGAK ARILSLIDMG IKEGAKLELD GRDVKVAGFE EGNFIGPTIF SGVKTDMTIY THEIFGPVLV VMEVDTLDEA IALVNANPMG NGVGIFTQSG AAARKFQSEI DVGQVGINIP IPVPVPFFSF TGSRGSKLGD LGPYGKQVVQ FYTQTKTVTA RWFDDDTTAG PVNTTIRLH
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