Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5283 |
Symbol | |
ID | 6128093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2386104 |
End bp | 2386961 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652372 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001778900 |
Protein GI | 170737640 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.287276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCTTT CGCTCGAAAT CGACCTGCTG CGCTCGTTCG TCGTGATCGC CGAGGTGCGC GCGCTGAGCC GCGCGGCCGC GCGCGTCGGC CGCACGCAAT CCGCGCTCAG CCAGCAGATG AAGCGGCTCG AGGAAGTGGT CGACCAGCCG CTGTTCCAGC GCACCGGCCG TGGCGTGGTG CTGACGCAGC CGGGCGAGCG GCTGCTCGTG CATGCGCAGC GCATCCTGCG GCTGCACGAC GAGGCGATGG CCGACCTGTG CGGCACGGGG CTGTCGGGGA CGATCCGGTT CGGGTGCCCG GACGATTACG CGCAAGTGTG GCTGCCGTCG CTGCTGCGGC AGTTTTCGAG CCAGCATCCG CAGGCGATCG TCGAAGTCGT CTGTGGGCCG ACGCCGCGAC TCGTCGAACA GCTGGAGAAG CGCGCGGTCG ATCTGGCGAT GATTTCCGTG CCGGACGACG GCGCGACCGA CGACGTCATT CGCCGCGAGC CGCTGGTCTG GATCGGCTAT CCGGGGCTCG CACCCGCGCA TTTCGATCCG CTGCCGCTCG CGCTGTCCGA TCGCGACACG CTCGATCACC TCGCGGCGTG CGACGCGTTG AACCGCGCCG GCCGCGACTA CCGCGTCGCG TATGCGAGCA GCAGCCTCGC CGGGCTGATC GCGCTGGTGC GTTCGGGCCA GGCGTTCGCG GTGATGACGC AGACGGCCGT GCCGGCCGAC CTCGCGATCG TCAACGGCGA TCCGCGCTTG CCGCCGTTGC CGGCGGTGGG CATTACGCTG CGGTTCGACC GGAAGCGGCC GTCGCACCTG ACGGCCGCCT TCGCCGACCA TATCCGGCAA ACGCTGCCGT TGCTTTGA
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Protein sequence | MALSLEIDLL RSFVVIAEVR ALSRAAARVG RTQSALSQQM KRLEEVVDQP LFQRTGRGVV LTQPGERLLV HAQRILRLHD EAMADLCGTG LSGTIRFGCP DDYAQVWLPS LLRQFSSQHP QAIVEVVCGP TPRLVEQLEK RAVDLAMISV PDDGATDDVI RREPLVWIGY PGLAPAHFDP LPLALSDRDT LDHLAACDAL NRAGRDYRVA YASSSLAGLI ALVRSGQAFA VMTQTAVPAD LAIVNGDPRL PPLPAVGITL RFDRKRPSHL TAAFADHIRQ TLPLL
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