| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5255 |
|---|
| Symbol | |
|---|
| ID | 6128066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2356111 |
|---|
| End bp | 2356998 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652346 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001778874 |
|---|
| Protein GI | 170737614 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.294771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG AAAACTCGGA ACTCGAAGCA TTCGTCGCCG TCGCGGAACT CGGCACGTTC
CATCGCGCGG CGGAAAAACT GAACCTGACC CAGCCGGGGC TGTCGCGCCG CATCCAGAAA
CTCGAGCAGA CGCTCGGCGT CGAGTTGTTC CAGCGCACCA CGCGAAGCGT GACGTTGACG
GGTGTCGGCC GCCAGTTCCT GCCGATGGCG CGCGAGCAGA TCGCGCAGCT CGGCATGATG
CTGTCGTCGA TCCAGGACAT CGCGCAAAAA CGTTACGGCA AGGTGCGGCT CGCGTCGATC
CCGACGATCG TCGCGCAGGC GCTTCCCGAC GTGCTGCGTC GCTACGCCGC AAAGTATCCG
CACGTCGCCG TGCAGATCCT CGACGGCAAT CATGACTTCG TGCTGTCGCA GGTGCGCGCG
GGCATCGCCG AATTCGGCGT GAGCCTGCAT CCCGGTGACG ACGACGATCT CCTGTTCGAA
CCGCTCTTCA CCGACCGTTA CGTGCTCGCG GCGCATGACG ACGATCCGCT GGCGCGCGCG
GACGCCGTCA CGCTCGGGGA GTTGCGCCAG GCGAAGCTGA TCATCGGCGG TCGCGACAGC
GGCAACCGCC TGCTGCTCGA AATGCTGATG GGCCAGGAAG CGGTGCGAAC CCGCTGGTTC
TACGAAGTCG AGCACATCTC GTGCGTCGCG GCGCTGGTGG CGGCCGGGGT CGGCTGCGCG
ATCCTGCCCG AGAGCGCACT GCGTGCGTAC GGCTCGCCGG CGGTGCGCGC GGTGCCGATC
GCGAGCCCGA CGATCGAGCG CACGGTCGGC ATCGTTCGGC ATCGCGGCAT TTCGATGTCC
AGCTTCGCGG GCGACCTCCA GGCGCTGGTG AAGGCGTCGT TCGCGTGA
|
|---|
| Protein sequence | MKIENSELEA FVAVAELGTF HRAAEKLNLT QPGLSRRIQK LEQTLGVELF QRTTRSVTLT
GVGRQFLPMA REQIAQLGMM LSSIQDIAQK RYGKVRLASI PTIVAQALPD VLRRYAAKYP
HVAVQILDGN HDFVLSQVRA GIAEFGVSLH PGDDDDLLFE PLFTDRYVLA AHDDDPLARA
DAVTLGELRQ AKLIIGGRDS GNRLLLEMLM GQEAVRTRWF YEVEHISCVA ALVAAGVGCA
ILPESALRAY GSPAVRAVPI ASPTIERTVG IVRHRGISMS SFAGDLQALV KASFA
|
|---|
| |