Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5178 |
Symbol | |
ID | 6127989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2269127 |
End bp | 2269951 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641652269 |
Product | OmpW family protein |
Protein accession | YP_001778797 |
Protein GI | 170737537 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0863874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC TGATTGTCGC GGGTGTCGTC GCTGGCGTAT CGACGCTCGC ATCGGCCCAG CAGGCGGGCG ACAACGTCGC GACGCTGGGC TGGCTGCACA TCATGCCGCA GGATTCGACC AACGGGCTGA CGACGAATCT CGCGAGCATG CCGATCAACG GGCCGTTGCG CCTGCCGGGT TCGTTCACGT CGCCGGGCAC GAGCCTGACG GTCAACAACG CCGATACGGT CGGCCTCACG CTCACGCACT TCTTCACCGA TCACATCGCG GTGACGTCGG TGCTCGGCGT GCCGCCGGAG TTCACACTGA CCGGACACGG CGTGATCAGG CCGCCCGGCC CGGCCGGCGC GCTCGGCAAC GTCGACATGG ACAAGTCCGC GAACCAACCG GCCGTGAAGA ACGCGCGGCA GTGGAGCCCG ACGATCATCC TGCAGTACTA CTTCAATTCG TCGACGGCGA AGTTTCGTCC GTTCGTCGGG ATCGGCGTGG CCTACAGCTG GTTCAGCAAC ATCGAACTGA ACGGCAACTT CGCGAAGGAC ATCAACGAGA ACCTCGGCAG CGTGCTCGCG GCCGGCGCCG GCAAGCCGGG CGCGACGTCG GTCGAGGGCA AGGCGTCGTC GTCGTTCACG CCCGTCTACA ACATCGGCGC GAGCTACGCG ATCGACAAGC ACTGGGGGCT CACGGCGACG CTGACCTACA TGCCGCTGAA GACCTACTCG TCGCTGGTGA TCAAGGCGGC CGACGGCTCG ACGCTCGCGA CCACGCGCAC GCGGCTGAAG GCTGACCCGC TGATCACGTT CGTCGGGATT TCCTACAAGT TCTGA
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Protein sequence | MKKLIVAGVV AGVSTLASAQ QAGDNVATLG WLHIMPQDST NGLTTNLASM PINGPLRLPG SFTSPGTSLT VNNADTVGLT LTHFFTDHIA VTSVLGVPPE FTLTGHGVIR PPGPAGALGN VDMDKSANQP AVKNARQWSP TIILQYYFNS STAKFRPFVG IGVAYSWFSN IELNGNFAKD INENLGSVLA AGAGKPGATS VEGKASSSFT PVYNIGASYA IDKHWGLTAT LTYMPLKTYS SLVIKAADGS TLATTRTRLK ADPLITFVGI SYKF
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