Gene Bcenmc03_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5178 
Symbol 
ID6127989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2269127 
End bp2269951 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID641652269 
ProductOmpW family protein 
Protein accessionYP_001778797 
Protein GI170737537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0863874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TGATTGTCGC GGGTGTCGTC GCTGGCGTAT CGACGCTCGC ATCGGCCCAG 
CAGGCGGGCG ACAACGTCGC GACGCTGGGC TGGCTGCACA TCATGCCGCA GGATTCGACC
AACGGGCTGA CGACGAATCT CGCGAGCATG CCGATCAACG GGCCGTTGCG CCTGCCGGGT
TCGTTCACGT CGCCGGGCAC GAGCCTGACG GTCAACAACG CCGATACGGT CGGCCTCACG
CTCACGCACT TCTTCACCGA TCACATCGCG GTGACGTCGG TGCTCGGCGT GCCGCCGGAG
TTCACACTGA CCGGACACGG CGTGATCAGG CCGCCCGGCC CGGCCGGCGC GCTCGGCAAC
GTCGACATGG ACAAGTCCGC GAACCAACCG GCCGTGAAGA ACGCGCGGCA GTGGAGCCCG
ACGATCATCC TGCAGTACTA CTTCAATTCG TCGACGGCGA AGTTTCGTCC GTTCGTCGGG
ATCGGCGTGG CCTACAGCTG GTTCAGCAAC ATCGAACTGA ACGGCAACTT CGCGAAGGAC
ATCAACGAGA ACCTCGGCAG CGTGCTCGCG GCCGGCGCCG GCAAGCCGGG CGCGACGTCG
GTCGAGGGCA AGGCGTCGTC GTCGTTCACG CCCGTCTACA ACATCGGCGC GAGCTACGCG
ATCGACAAGC ACTGGGGGCT CACGGCGACG CTGACCTACA TGCCGCTGAA GACCTACTCG
TCGCTGGTGA TCAAGGCGGC CGACGGCTCG ACGCTCGCGA CCACGCGCAC GCGGCTGAAG
GCTGACCCGC TGATCACGTT CGTCGGGATT TCCTACAAGT TCTGA
 
Protein sequence
MKKLIVAGVV AGVSTLASAQ QAGDNVATLG WLHIMPQDST NGLTTNLASM PINGPLRLPG 
SFTSPGTSLT VNNADTVGLT LTHFFTDHIA VTSVLGVPPE FTLTGHGVIR PPGPAGALGN
VDMDKSANQP AVKNARQWSP TIILQYYFNS STAKFRPFVG IGVAYSWFSN IELNGNFAKD
INENLGSVLA AGAGKPGATS VEGKASSSFT PVYNIGASYA IDKHWGLTAT LTYMPLKTYS
SLVIKAADGS TLATTRTRLK ADPLITFVGI SYKF