| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5158 |
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| Symbol | |
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| ID | 6127969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2248216 |
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| End bp | 2250258 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641652249 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001778777 |
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| Protein GI | 170737517 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.493898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATG ACGTAGAGCA GGCGGCCGGG TCACGGGCCG CGCATCCCGC CGGCTGGCCC
GCGCCGTCGA TCCAGAAGGC CCATGAGCGT TCGGAGACGT TCGGCCTGCA GGTATCGGCG
CGGCCCGACT ACGACGTGCT GTCGAACGCG GCGCTGGTGC TCAAGCGCGA GCAGAGCCGG
GTGCTGTGCG TGCACGCGAT GCCGGTGATG GAGACGCTGC ACGAGCAGAT CGTCAACACG
CAGAGCATGA TCGTGCTGAC CGATGCGGAA GGGCTGATCC TGCATTCGAT CGGCGACGAC
GATTTCCTGC GCCGCGCGGA GAAGGTCGCG CTGCGCCCCG GCGCGAACTG GGCGGAGAAC
CGGCAGGGCA CCAACGCGAT CGGCACGGCG CTGGCCGAGC TGTGCCCGAT GGTCGTCCAC
GGCGACCAGC ACTTCCTGGC CGCGAACCGC TTCCTGACCT GTTCGAGCGT GCCGATCCTC
GATCCGTACG GCGACGCGAT CGGCGTGCTC GACGTGACGG GCGATCACCG CAGCTATCAC
CAGCACACGA TGGCGCTCGC GAAGATGTCG GTGCAGATGA TCGAGAATCA TCTGTTTACG
ACGACGTTTC AGGAAACGCT GCAGGTGTCG TTCCATGGCC GCCCCGAATT TCTCGGCACG
CTGATGGAGG GGATCGTCGC GTTCACCGCC GATGGCCGCT TCCTGTCGGC CAATCGCAGC
GCGCAGTTCC AGCTCGGCAT GCCGCTCGCC GCGCTGCGCG CGCACACGCT GTCGTCGCTG
TTCGACGTCA CCAGCGCCCA GCTGATCGAC CGCATGCGCG CGAGCACCGA CCGGCACCTG
ATGCTCAATC TCGGCAACGG CGCGGTGGTC TGCGCGCGCG TGCATTTTCG CCGCGCGACG
CTCGCCGAAG GCAGCCGGCC GACGGACGTC CACGATGCAG GGGCGCCGGG CGCGCGCGCG
AACGCGGTGC CCGCGCCGGC GGCGGGCACG TCGGCCGGCC TGTCGCGGCT CAACTATCTC
GACACCGGCG ATGCGCAGGT CGCCAGCGTG ATCGCGAAGG TACGCAAGGT GATCGGCAAG
GACATCCCGA TCCTGATCAC CGGCGAGACC GGCACCGGCA AGGAACTGCT CGCGCAGGCG
ATCCACAACG ACTCGCCGCG CCGCGACGCG CCGTTCGTCG CGGTCAACTG CGCGTCGATT
CCGGAGACGC TGATCGAGTC CGAGCTGTTC GGCTACGAGG AGGGCGCGTT TACCGGCGCG
CGCCGCAAGG GGGCGATCGG CAAGCTGCTG CAGGCGAACG GCGGCACGCT GTTCCTCGAC
GAGATCGGCG ACATGCCGTA TCCGCTGCAG GTGCGGCTGC TGCGCGTGCT GCAGGAGCGC
CTCGTCAACC CGCTCGGGTC GACGAAGACG ATCGCCGTGG ACATCGCGAT CATCTGCGCG
ACGCACCGTG ACTTGCGCGA GATGATCGCG CAGAACCGTT TCCGCGAGGA TCTCTACTAC
CGGCTGAACG GCCTCGTGGT GCGCCTGCCG CCGTTGCGCG ACCGCACGGA TCTCGCGGTC
GTCGTGCAGA AGATGCTGCA GCGCGAAGCG TTCGCGGGGC CGGGCCGGCC GCCGCTGTCG
GTCGCGCCGG ACGTCATGGA GTTGTTCGTG CGGTGCACGT GGCCGGGCAA CTTCCGCCAG
CTCGGCAACC TGCTGCGCAC GGCGGCCGCG ATGGTCGACG ACGACGGTGA AATCCGGCGC
GAGCACCTGC CCGACGACTT CTTCGACGAC CTGCGGCGCG GCGATGCGCA CGTCGGGCAC
GCAGGACAGG CGGCGCCCGA TTCGCCTGCC GCGGCGAGCG CCGGGCCGTG CGTCGCGGAC
GCGTTGCCGC CCGCCGACGC GCGCCTGCAG GACGTCGCCG CGTCCGCGAT CGCCGCCGCG
CTCGCGCGTC ATGGCGGCAA CGTGTCCGCC GCGGCGCGCG CGCTCGGCGT CTCGCGCAAC
ACGATCTACC GGAAGATGCC GGCCGCCGAC GCGGGACGCC AGCCGTCGTC CGACGAAGAC
TGA
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| Protein sequence | MRDDVEQAAG SRAAHPAGWP APSIQKAHER SETFGLQVSA RPDYDVLSNA ALVLKREQSR
VLCVHAMPVM ETLHEQIVNT QSMIVLTDAE GLILHSIGDD DFLRRAEKVA LRPGANWAEN
RQGTNAIGTA LAELCPMVVH GDQHFLAANR FLTCSSVPIL DPYGDAIGVL DVTGDHRSYH
QHTMALAKMS VQMIENHLFT TTFQETLQVS FHGRPEFLGT LMEGIVAFTA DGRFLSANRS
AQFQLGMPLA ALRAHTLSSL FDVTSAQLID RMRASTDRHL MLNLGNGAVV CARVHFRRAT
LAEGSRPTDV HDAGAPGARA NAVPAPAAGT SAGLSRLNYL DTGDAQVASV IAKVRKVIGK
DIPILITGET GTGKELLAQA IHNDSPRRDA PFVAVNCASI PETLIESELF GYEEGAFTGA
RRKGAIGKLL QANGGTLFLD EIGDMPYPLQ VRLLRVLQER LVNPLGSTKT IAVDIAIICA
THRDLREMIA QNRFREDLYY RLNGLVVRLP PLRDRTDLAV VVQKMLQREA FAGPGRPPLS
VAPDVMELFV RCTWPGNFRQ LGNLLRTAAA MVDDDGEIRR EHLPDDFFDD LRRGDAHVGH
AGQAAPDSPA AASAGPCVAD ALPPADARLQ DVAASAIAAA LARHGGNVSA AARALGVSRN
TIYRKMPAAD AGRQPSSDED
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