Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5155 |
Symbol | |
ID | 6127966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2242326 |
End bp | 2244047 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652246 |
Product | methanol/ethanol family PQQ-dependent dehydrogenase |
Protein accession | YP_001778774 |
Protein GI | 170737514 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.843195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCTCGGCTTC AGCGAGCCGG CTGGCGACGA TCGGCATCGC GGTGGCGGCC GCCGTCGCGC TGAACCCCGG CCTCGTCGAA GCGGCCGCGG ATTACCCGGC CGTGACCTAC CAGCGCCTGA CCGATGCACA CGGCGACCCG GGCTGGCTGA CCTACTACCG CACCTACGAC GGCCGCTCGC ATTCGCCGCT CAAGCAGATC GACACGTCGA ACGCGAAGGA TCTCAAGCAG GTGTGGGCAT ACAAGTTCCC CGCCGACCTG AAGCAGGGCT TCGAGGCCAC GCCGATCGTC AACGGCAACT ATCTGTTCGT GACGACGCCG AAGGACAACG TCTACGCGTT CGATGCGAAG ACCGGCAAGC AGCTGTGGAA ATACGAGCCG AAGCTCGGCG CGGCCTCGTT CAAGACCGCG TGCTGCGACG TCGTCAACCG CGGCGTCGCG CTGTACGGCA AGAACGTCTA CATCGCGATG CTGAACGGCG AAATCGCGGC GCTCGACGCG CAGACCGGCA CGCTCGTGTG GAAGAAGCAG ATGTTCGAGC CGGGCCTCGG CTACGCGTTC TCGCTCGCGC CGCTCGCGAT CGACGGCGCG ATCGTCGTCG GCACGTCCGG CGGCGAATAC GGCATTCGCG GCTACATCGC CGCGCTGAAT CCGGAGGACG GCTCGCAGGT CTGGAAACGC TACACGATCC CCGCCGCCGG CGAAAAGGGC GCGGAAACCT GGCCCGACGG CATGCAGAGC CATGGCGGCG GCGCCGCGTG GCTCACCGGC ACCTACGACG CCGCATCGCG CACGCTGTAC TGGGGGGTCG GCAACCCCGG CCCGTGGCTC GCCGCGCTGC GCCCCGGCGA CAACCTGTAT TCCGACTCGC TGCTCGCGCT CGATGCGAAG AGCGGCAACC TGAAGTGGCA CTACCAGTAC ACGAACAACG ACACGTGGGA CTACGACGGC GTGAACGCGG CCGTCCTCGC GGACATCAAG TACAAGGGCA AGGACTACGA CGCGATCATC CACGCCGACC GCAATGGCTT CTTCCACGCG ATCGACCGCA CGACCGGCAA GCTGATCTAC GCGACGCCGT TCGTGAAGGC GTTGTCGGTC ACCGGCTATA CGGAGGACGG CAAGCCGATC CAGGACGCGT CGAAGTTCCC GAAGGCTGGC ACGACGATCG AAACGTGCCC GAGCTTCCTC GGCGGCAAGA ACTGGTGGTC GATCTCGTAC GACCAGGAAC GCAACATCGC GGTCGTGCCG GCGCTGCATG CGTGCATGAG CCTGACCGGC AAGTCGGTCA GCTACATGGA AGGCCTACCG TATCTCGGCG AAGGCTTCGA GATCAAACCT GAACCGGGCA GCGAAGGCTA CGGCGAACTG ACGGCCATCG ACGTGAACAC CGGCAAGAAG CTGTGGAGCC ACTGGTCGAA GAAGCCGTGG AACGGCGGCG TCGCGACCAC CGCGAGCGGC CTCGCGTTCA GCGGCTCGCT CGACGGCCAC CTGTACGCGT TCGACACGGC GACCGGCAAG GTGCTGTGGG AAAGCCCGCA ACTGGCGAGC GGCATCATCT CGCAGCCGTC GGTGTATGAA GTCGACGGCA AGGAGTATGT CGCGGTGCTC GCCGGCTACG GCGGCGCGAA CCCGATCTGG GGCGGCCCGA TGGCCGACAT CGCGAAGGAC GTTCCGCGCG GCGGCACGCT CTACGTGTTC GCGCTCAACT GA
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Protein sequence | MKKLSASASR LATIGIAVAA AVALNPGLVE AAADYPAVTY QRLTDAHGDP GWLTYYRTYD GRSHSPLKQI DTSNAKDLKQ VWAYKFPADL KQGFEATPIV NGNYLFVTTP KDNVYAFDAK TGKQLWKYEP KLGAASFKTA CCDVVNRGVA LYGKNVYIAM LNGEIAALDA QTGTLVWKKQ MFEPGLGYAF SLAPLAIDGA IVVGTSGGEY GIRGYIAALN PEDGSQVWKR YTIPAAGEKG AETWPDGMQS HGGGAAWLTG TYDAASRTLY WGVGNPGPWL AALRPGDNLY SDSLLALDAK SGNLKWHYQY TNNDTWDYDG VNAAVLADIK YKGKDYDAII HADRNGFFHA IDRTTGKLIY ATPFVKALSV TGYTEDGKPI QDASKFPKAG TTIETCPSFL GGKNWWSISY DQERNIAVVP ALHACMSLTG KSVSYMEGLP YLGEGFEIKP EPGSEGYGEL TAIDVNTGKK LWSHWSKKPW NGGVATTASG LAFSGSLDGH LYAFDTATGK VLWESPQLAS GIISQPSVYE VDGKEYVAVL AGYGGANPIW GGPMADIAKD VPRGGTLYVF ALN
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