Gene Bcenmc03_5147 details

Gene Information

• Locus tag: Bcenmc03_5147
• ID: 6127958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia MC0-3
• Kingdom: Bacteria
• Replicon accession: NC_010515
• Strand: +
• Start bp: 2225083
• End bp: 2231085
• Gene Length: 6003 bp
• Protein Length: 2000 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 641652238
• Product: alpha-2-macroglobulin domain-containing protein
• Protein accession: YP_001778766
• Protein GI: 170737506
• COG category: [R] General function prediction only
• COG ID: [COG2373] Large extracellular alpha-helical protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATTTGC TGCGCTTCCT GCTGCTCCTG CCGATTCGCG CGGCGGGCTT CGTCTGGTGG 
CTGTTCGGCT GCGCGTTGCG GCCGCTGGTC GGCGACGTGT CGTGGACGGC GCCCGCGTGG 
ATGGGCGTTA CCGCCGCGGC CGTGCGCCGC CGCCCGTGGC ATGCCGGCGG CCTCGTGCTG 
CTCGCGGCCG CGCTCGGTTA CGGTGGCTAC TGGTTCAAGC ATCGCCCGAA GCCGCCCGAG 
CCCGAAACCG TCGGCTTCAC CGTGAAGGCG CCGGCGATCA CGACCTACGA GGTCGACGAT 
GCCGACAAGC CGAAGATCAC CGTGCACCCG CTGGAAGTGG CGTTCTCGCA ATCGGCCGCG 
CCGATCGAGC AGGTCGGCAA GCCGGCCGGT GACGGCATCG AGATGACGCC CGCACTGAAG 
GGCGCGTGGG AGTGGGCCGA CGACAAGACG CTGCGTTTCA CGCCGGCAGC CGACTGGCCG 
GTCGGCGCGC ACGTCGAGGT GCGCTTCGCC GTGCATCGCG TGTTCGCGCC GCAGGTGACG 
ATGCACGACG ACCGTTTCGC GTTCGACGTG CCGGCGTTCG CCGCGACGTT CGGCGACAAC 
CAGTTCTACC AGAACCCCGA CAATCCGGCG GAGAAGCAGG CGCTGCTGCA GTTGCGCTTC 
AACTACCCGG TCGATCCGGC CGAGTTCGAG AAGCGCATCG GCCTCGTGCT GGTCGGCCGC 
GACGGCAAGA CCGTGTCGCC GCTGCACTAC ACGGTCAACT ACGACAAGAT GAAGACGAGC 
GCGTGGGTCC ACTCGCAGCC GCTCGAGATT CCGCGCGATC CGCTCGCGGT GCGGCTCGAC 
CTCGACAAGG GCGTGAAGAG CGCGCGCGGC GGCAACGGCA CGCCGGACGG GCTGCATGCG 
TCGGTCGGCG TGCCGGGGCT GTACAGCCTG TCGATCGGCA ATATCGCGCC GACGCTGGTT 
GACAACGAGC GCTACGAGCC CGAACAGGTG CTCGTCGCGG AAACCTCCGA CGGCGTACGC 
GGCGCCGAAC TGGCCGCGCG CGCGAAGGCG TGGGTGCTGC CGAAGCGCAA GCCGGGCGTC 
GAGCAGGCGG ACGACGATCC GCCGTACGAA TGGAACGTGG CCGACATCAG CGACGCGGTG 
CTGAAGCAGT CGAAGCCGCT GCCGCTCGAC GTCGTGCCGA CCGAGAACGA CTTCGCGACG 
CTGCAGAGCT TCAAGTACCA CGCGACGCCG GGCGAGCGCG TCGTCGTGCG CTTCGAGGGC 
GACCTGAAAT CGGCCGGCGG CTACCGGCTC GGCGCGCCGG TGACGAACGC CTTCACGGTG 
CCCGACTATC CGAAGCTGCT GCGTTTCATG GCCGACGGCT CGCTGCTGTC GATGAGCGGC 
AGCAAGCGGC TGTCGGTCGT GTCGCGCAAC CTGCCGGGCA TGAAGGTCGA GATCGGCCGC 
GTGCTGCCCG ACCAGATCCA GCATCTCGTG AGCTTCAACA ACGGCACGTA CGCGCGGCCC 
GAGCTGTCGT ATTCGTTCAG CGAGGATCAC ATCGTCGAGC GCTTCGTGCA GACCCGTGCG 
TTCCCGGCCG GCGATCCCGG CCGTGCACAT TACGAAGGCA TCGACCTCGG CCAGTACCTG 
AAGGACGGCA AGCGCGGCGT GTTCCTGCTG CATCTGTCGA AGTACGATCC GGCGGCCGAG 
AAGAAGAAAA CCGACGACGC GAAGGACGGC GATTCGGCAT CGGATGACGG CAGCCAGGAT 
CAGTCCGACA ACGCCGATTC CGGCGACAGC AGCGGCAACG GCGACGACGG CGACAACGCG 
CTCGGCGACA CGCGCCTGAT CGTCGTGACC GATCTCGGGA TGCTGGTCAA GAAGGCGCTG 
GATGGCAGCC AGGACGTGTT CATCCAGTCG ATCCGCACGG GCCGCCCGGT TGCGGGCGCA 
ACCGTGTCGG TGCTCGCGGT GAACGGCCAG GCGCTGTTCA CACAGACCAC GAGCGCCGAC 
GGCGTCGTGC ATTTCCCCGC GTTCAAGGGG CTCGACCGCG AGAAGCGTCC GCAACTGTAC 
GTCGTGAAGA AGGACAGCGA TCTGTCGTTC CTGCCGGTGG CCGGCCGCGA CCGCCAGCTC 
GACTTCTCGC GCTTCGATGT CGACGGCGAA CGCAACGCGA CGGGCCAGGG GCAACTGTCC 
GCGTACCTGT TCTCGGATCG CGGGCTGTAC CGGCCCGGCG ATCCGTTCCA CATCGGCCTG 
ATCGTGCGCG CGGCCAGCTG GGCGCGCAGC CCGGCCGGCG TGCCGCTGCA GGCGGAGATC 
GTCGACCCGC GCGGGATGAC CGTCGAGCGC AAGCCGGTGA CGGTCGACGC GACGGGTTTC 
ACCGAGCTCG GCTACACGAC CGCCGAAACG GCGCCGACCG GTACATGGAC GGTCAATCTG 
TACATCGTGA AGGACGGCCA GCCGGGCGCC GAGCCGATCG GCAGCACGAC GGTGCAGGTG 
AAGGAATTCC TGCCCGACCG GATGAAGGTC GACGCGAAGC TGTCGCAGCA GGTCGTCGAA 
GGGTGGGTGA AGCCGAAGGG GCTGAAGGGC CTCGTCGATG CGCAGAACCT GTTCGGCACA 
CCGGCCGAGA AGCGCCGCGT CGCGGCGACG CTGACGCTGC GTCCCGTATG GCCGTCGTTC 
CGCAGCTGGC AGGGGTATCA CTTCTTCGAC GCACGCCGCG CGAAGGAGGG CTATACGACC 
ACGTTGCAGG ACGGCACGAC CGACGACAAG GGCCATGCCG AGTTCGATCT CGATCTCGAC 
AAGTACGCGG ACGCGACCTA TCAGCTCTAC TTCCAGGCGA AGGCGTACGA AGCGGAAGGC 
GGGCGCAACG TCGCCGCGAA CGCGCAGACG CTCGTATCGA ACAACGACTG GCTCGTCGGC 
TACAAGTCGG TCGACGATCT CGGCTACGTG AAGCGCGGCA GCCCGCGCAC GGTGCGGCTC 
GTCGCGATCG ACCCGGGCGC GAAGGCGATC GACGTGAAGG ACCTGCGCGC GCAGCTGGTC 
GAGCAGCGTT ACGTGTCGGT GCTGACCAGG CAGGATTCCG GTGCATACAA ATACGATTCG 
CGGCTGAAGG AAGTGCCGGT CGACGACAAG CCGCTGTCGA TTCCCGCGGC CGGACTCGAC 
TACGCGCTGC GCACCGACAA ACCGGGCAGC TATGCGCTCG TGATCCGCCG CGCGGATGGC 
GCGGCGGTGA ACCGGATCGA GTATTCGGTC ACGGGCGCCG CGAACGTCAC GCGTTCGCTC 
GACCGCAACG CGGAGCTGCA GGTGAGCCTC GCGAAGCACG ACTTCAAGCC GGGCGAGCAG 
GTGGAAATCG CGATCCGTGC GCCGTATGCG GGTAGCGGCC TGATCACGAT CGAGCGCGAC 
AAGGTGTATG CGCACGCATG GTTCCATGCG GACACGACGA GTTCCATCCA GCACATCACG 
GTGCCGACCG GCTTCGAAGG CAACGGCTAC ATCAACGTGC AGTACATCCG CGATCCGTCG 
TCGGACGAGA TCTTCATGAG CCCGCTGAGC TACGGCGTCG TGCCGTTCTC GGTGAATCTC 
GACGCGCGCC GCAACGCGGT GAGCGTCGAC GCGCCGGCGC TCGTGAAGCC GGGCGACACC 
GTCAACTTCA CCGTGCATTC GGCGAAGCCC GCGAAGGTCG TCGTGTTCGC GGTCGACGAG 
GGCATCCTGC AGGTCGCGCG CTACAAGCTC GGCGATCCGC TGAAGTTCTT CTTCCGCAAG 
CGGATGCTCG AAGTGGGCAC GTCGCAGATC CTCGACCTGA TCCTGCCGGA CTTCGAGAAA 
CTGATGGCGA TGGCCGCGCC CGGCGGCGAC GCCGACGACG CGATCGGCCG CCAGCTGAAT 
CCGTTCAAGC GCAAGCGCGA CAAGCCGGTC GTCTACTGGT CGGGGATCGT CGACGTGAAC 
GGTGACACGC GGCTGAGCTA CACGGTGCCC GACTACTTCA ACGGGAAGCT GCGCGTGATG 
GCCGTGTCGG TGTCGCCGGA TCTGGTCGGC ACGTTCGAAG GCGCGACGAC GGTGCGCGGC 
GATTTCGTGC TGTCGCCGAA CGTGCCGACG ACGCTCGCGC CGGGTGACGA GGCCGACGTC 
AGCGTCGGCG TCGCGAACAA CCTGACGGGC GTCGGCAACC AGCCGGTGCC GGTCGCGGTC 
ACGCTGAAGA CGGGCCCGCA GTTGCAGGTG ATCGGGCCGG CGACGCAGAA CGTCGCGCTC 
GCGCCGCAGC ACGAAGGCGT CGCGCTGTTC CGCGTGAAGG CGACCGATAC GCTCGGCTCG 
GGCGCGCTGT CGTTCGGCGC GCGCTACGGC GCGAAGGGCG CACAGCAGCG CGTCGACGTG 
TCGGTGCGGC CGGCCGCGGC GTTCCGCACG CAGCTCGACA TCGCGCGGCT CGACCCGGGC 
AAGAAGGCGA GCGTGCCGAA CCTGCGGTCG ATGTACGACG CGTATGCGTC GCGCGACGCG 
AGTATCTCGA CCGCGCCGCT GGTGTTGTCC GAAGGGCTGT CGTCGTATCT CGTCAACTTC 
GAGCACGCCT GCAGCGAGCA GATGGTGAGC GCGGCCGTGC CGCGCATGTT CGCGGCGAAG 
TGGCTGTCGG TGCGTGCGCT GACGAGCGCG ATGCATGCGC CCGAGGCCGG CGCCGGCGTC 
GATGCAGCGA ACGCGAGCGC GATCGCGCAG TTCCTCGGCA TGCTGCGCAG CCGGCAGAAC 
GCGCAGGGTG GCTTCGGCCT GTGGAGCGCG ACGCCCGATG CCGATCCGTT CGTGTCCGCG 
TATGCGATGC ACGTGCTGCT CGACGCGCGA GATCGCGGCG TCGCGGTGCC GAAGGACATG 
CTCGACGCGG GCAACGCGTA CTTGCAGCGG CTCGCCGCGA ACGACTCGCT CGGCTCGCTC 
GACCTGTTGC GTCAGCGCGC ATACGCGGTG TACCTGCTGA CGCGCCAGGG CAACGTGACG 
ACCAACAGCC TCGCGGCCGT GCAGAAGCGG TTGCAGGCGG CCTATCCGAA CGACTGGCGC 
AATGATCTCG CGGCCGCGTG GCTCGCCGCG TCGTATCAGT TGCTCAAGCA GGACAAGGAA 
GCCGCCGCGC TGATCGCGGG CCCGCAGGCA TTGCTCGAAC GCAAGCGCGC GTCCGACGGC 
GACTATTCGA CCGGCTACTA CATCGACCCG CTGACGCGCG ACGCGAGCGT GCTGTACCTG 
CTCGCGAAGC ACTTCCCGGA GCGCGTGCGC AAGCTGTCGC CGCGCGCGAT GGACAACCTC 
GCCGCGCCGC TCGTCGACAA CCGCTACAAC ACGCTGTCGT CGGCGATGAC GATTCTCGCG 
CTCGACGCGT ACGCGGCATC GAACGCAGGC CAGCTCGATC AGCTCGCGAT CAACGAGGTG 
CGGGCGGGCG CCGCGCCGAA GGACGTATCG TCGATCCAGG CGAACCTCGT GCGCTCGGGT 
ACGTGGGCGG CCGGCGCATC GCGGGTCGAC TTCGTGAACG GCAGCACGTT GCCGGCGTGG 
TGGGTCGCGA GCCAGTCGGG CTACGACCGC GGCACGTCGA CGAAGGCGAT CAGGAGCGGG 
CTGGAGATCG TGCGCGACTA CACGGATACC GACGGCAAGC CGCTCGCGAG GATCGCGCTC 
GGCCAGGAGA TCGACGTGCA TCTGAAGATC CGCGCGACCG GTTCGGCGAA CGTCGGCAAC 
GTCGCGATCG TCGACCTGCT GCCGGGCGGC TTCGATCCGG TGATCGCGCC GCCGCCCGCG 
ACCGATACGC AAGACGAGAA CGGCGACGGC AGCGCGTCGG CGCCGGTGGC CGATGCGCCG 
TGGCATTCGC CGATCGGCGT GAAGGGCTCG ACGTGGCAGC CGCAGTTCGC CGATATCCGC 
GAGGATCGCG TGGTGATCTA CGGCACCGCG ACGACCGACG TGCGCGAGTT CGTCTACCGG 
ATCAAGGCGA GCAACGCGGG CCGCTTCGTT GCGCCGCCGG CCTACGGCGA ATCGATGTAC 
GACCGCCGCG TGCAGGCGCA GGCGCCGGGC GGCACGGCGC TGACGGTGGA GCGTGTGCGA 
TGA 

 

Protein sequence

MDLLRFLLLL PIRAAGFVWW LFGCALRPLV GDVSWTAPAW MGVTAAAVRR RPWHAGGLVL 
LAAALGYGGY WFKHRPKPPE PETVGFTVKA PAITTYEVDD ADKPKITVHP LEVAFSQSAA 
PIEQVGKPAG DGIEMTPALK GAWEWADDKT LRFTPAADWP VGAHVEVRFA VHRVFAPQVT 
MHDDRFAFDV PAFAATFGDN QFYQNPDNPA EKQALLQLRF NYPVDPAEFE KRIGLVLVGR 
DGKTVSPLHY TVNYDKMKTS AWVHSQPLEI PRDPLAVRLD LDKGVKSARG GNGTPDGLHA 
SVGVPGLYSL SIGNIAPTLV DNERYEPEQV LVAETSDGVR GAELAARAKA WVLPKRKPGV 
EQADDDPPYE WNVADISDAV LKQSKPLPLD VVPTENDFAT LQSFKYHATP GERVVVRFEG 
DLKSAGGYRL GAPVTNAFTV PDYPKLLRFM ADGSLLSMSG SKRLSVVSRN LPGMKVEIGR 
VLPDQIQHLV SFNNGTYARP ELSYSFSEDH IVERFVQTRA FPAGDPGRAH YEGIDLGQYL 
KDGKRGVFLL HLSKYDPAAE KKKTDDAKDG DSASDDGSQD QSDNADSGDS SGNGDDGDNA 
LGDTRLIVVT DLGMLVKKAL DGSQDVFIQS IRTGRPVAGA TVSVLAVNGQ ALFTQTTSAD 
GVVHFPAFKG LDREKRPQLY VVKKDSDLSF LPVAGRDRQL DFSRFDVDGE RNATGQGQLS 
AYLFSDRGLY RPGDPFHIGL IVRAASWARS PAGVPLQAEI VDPRGMTVER KPVTVDATGF 
TELGYTTAET APTGTWTVNL YIVKDGQPGA EPIGSTTVQV KEFLPDRMKV DAKLSQQVVE 
GWVKPKGLKG LVDAQNLFGT PAEKRRVAAT LTLRPVWPSF RSWQGYHFFD ARRAKEGYTT 
TLQDGTTDDK GHAEFDLDLD KYADATYQLY FQAKAYEAEG GRNVAANAQT LVSNNDWLVG 
YKSVDDLGYV KRGSPRTVRL VAIDPGAKAI DVKDLRAQLV EQRYVSVLTR QDSGAYKYDS 
RLKEVPVDDK PLSIPAAGLD YALRTDKPGS YALVIRRADG AAVNRIEYSV TGAANVTRSL 
DRNAELQVSL AKHDFKPGEQ VEIAIRAPYA GSGLITIERD KVYAHAWFHA DTTSSIQHIT 
VPTGFEGNGY INVQYIRDPS SDEIFMSPLS YGVVPFSVNL DARRNAVSVD APALVKPGDT 
VNFTVHSAKP AKVVVFAVDE GILQVARYKL GDPLKFFFRK RMLEVGTSQI LDLILPDFEK 
LMAMAAPGGD ADDAIGRQLN PFKRKRDKPV VYWSGIVDVN GDTRLSYTVP DYFNGKLRVM 
AVSVSPDLVG TFEGATTVRG DFVLSPNVPT TLAPGDEADV SVGVANNLTG VGNQPVPVAV 
TLKTGPQLQV IGPATQNVAL APQHEGVALF RVKATDTLGS GALSFGARYG AKGAQQRVDV 
SVRPAAAFRT QLDIARLDPG KKASVPNLRS MYDAYASRDA SISTAPLVLS EGLSSYLVNF 
EHACSEQMVS AAVPRMFAAK WLSVRALTSA MHAPEAGAGV DAANASAIAQ FLGMLRSRQN 
AQGGFGLWSA TPDADPFVSA YAMHVLLDAR DRGVAVPKDM LDAGNAYLQR LAANDSLGSL 
DLLRQRAYAV YLLTRQGNVT TNSLAAVQKR LQAAYPNDWR NDLAAAWLAA SYQLLKQDKE 
AAALIAGPQA LLERKRASDG DYSTGYYIDP LTRDASVLYL LAKHFPERVR KLSPRAMDNL 
AAPLVDNRYN TLSSAMTILA LDAYAASNAG QLDQLAINEV RAGAAPKDVS SIQANLVRSG 
TWAAGASRVD FVNGSTLPAW WVASQSGYDR GTSTKAIRSG LEIVRDYTDT DGKPLARIAL 
GQEIDVHLKI RATGSANVGN VAIVDLLPGG FDPVIAPPPA TDTQDENGDG SASAPVADAP 
WHSPIGVKGS TWQPQFADIR EDRVVIYGTA TTDVREFVYR IKASNAGRFV APPAYGESMY 
DRRVQAQAPG GTALTVERVR