| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5130 |
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| Symbol | |
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| ID | 6127942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2206829 |
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| End bp | 2209840 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652222 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_001778750 |
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| Protein GI | 170737490 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.564835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.907469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA AAGACCGCCT CGGCACCGGT GGCCGCATCA ATCGCGCGAT TCCGCTGACG
TTCACGTTCA ACGGCCGCAC GTACCAGGGC TTCCAGGGCG ACACGCTCGC GTCCGCGCTG
CTCGCGAACG GCGTGCATTT CGTCGCGCGC AGTTTCAAGT ATCACCGCCC GCGCGGGATC
GTCACGGCGG ACGTGGCGGA ACCGAATGCC GTCGTGCAGC TCGAAACCGG GCCGTACACG
GTGCCGAACG CGCGCGCGAC CGAGATCGAG CTGTATCAGG GGCTCGTCGC GACGAGCGTG
AACGCCGAGC CGACGCTCGA GAACGACAAG TACGCGATCA ACCAGAAGCT CTCGCGCTTC
ATGCCGGCCG GGTTCTACTA CAAGACCTTC ATGTGGCCGC GCAACATGTG GCCGAAGTAC
GAAGAGAAGA TCCGTGAAGC GGCCGGCCTC GGCAAGGCGC CCGAAGTGCT CGACGCCGAT
CGCTACGACA AGTGCTACGC GCACTGCGAC GTGCTCGTGG TCGGCGGTGG CCCGTCGGGC
CTCGCCGCCG CGCATGCGGC CGCCACGGCC GGCGCGCGCG TGATCCTCGT CGACGATCAG
CGCGAACTCG GCGGCAGCCT GCTGTCGTGC CGCGCGGAGA TCGACGCGAA GCCCGCGCTG
CAATGGGTCG AGAAGATCGA AGCTGAACTG CGCAAGCTGC CCGACGTGAC GATCCTGTCG
CGTAGCACCG CGTTCGGCTA TCAGGACCAC AACCTCGTGA CGGTCACGCA GCGCCTCACC
GATCACCTGC CGGTGTCGAT GCGCAAGGGC ACGCGCGAGT TGCTGTGGAA GGTCCGCGCG
AAGCGCGTGA TCCTCGCGAC CGGCGCGCAC GAGCGGCCGA TCGTGTTTGG CAACAACGAC
CTGCCGGGCG TGATGCTGGC GGGCGCGGTG TCGACCTACG TGCATCGCTT CGGCGTGCTG
CCGGGCCGCA ACGTGGTCGT GTTCACGAAC AACGACCGTG CATACCAGAC CGCGCTCGAC
CTGAAGGCGT GCGGCGCGAA GGTGACGGTC GTCGATTCCC GCGCGTCGTC GAACGGCGCG
CTGCCGGCCG CTGCGAAGCG GCAGGGCGTG ACGGTGATGA GCGGTGCGGT CGTCACGGCC
GCTTCGGGCA AGTGGCGCGT ATCGTCGATC GACGTCGCGT CCTACTCGAA CGGCCAGACC
GGCGGCAAGC TGCAGACGCT GCCGTGCGAC CTCGTCGCGA TGTCGGGCGG CTTCAGCCCG
GTGCTGCACC TGTTCGCGCA ATCGGGCGGC AAGGCGTGCT GGAACGACGA GAAGGCGTGT
TTCCTGCCGG GCAAGCCGGT GCAGGCGGAA GCGAGCATCG GTGCGGCGGC CGGCGAATTC
GGGCTCGCCC GTGCGCTGCG GCTCGCGGTC GATGCGGGCG TGGAAGCGGC GAAGGCCGCG
GGCTTCACGG CCGCGCAGCG CCCTGTCGCA CCGCAAGTAG CCGAAGCCGT CGAGGGCGCG
CTGCAACCGT TGTGGCTCGT CGGCAGTCGC GAGGCCGCGG CACGTGGACC GAAGCAGTTC
GTCGATTTCC AGAACGACGT CGCGGCGGCC GACATCCTGC TCGCCGCGCG TGAAGGCTTC
GAGTCGGTCG AGCACGTGAA GCGCTACACG GCGATGGGTT TCGGCACCGA CCAGGGCAAG
CTCGGCAACA TCAACGGGAT GGCGATCCTC GCGGGCGCGC TCGGCAAGAC GATTCCGGAA
ACGGGCACGA CGACGTTCCG CCCGAACTAC ACGCCCGTGT CGTTCGGCAC GTTCGCGGGC
CGCGAGACGG GCGACTTCCT CGACCCGATC CGCAAGACGG CCGTGCACGA ATGGCACGTC
GAGCACGGCG CGATGTTCGA GGACGTCGGC AACTGGAAGC GCCCGTGGTA CTTCCCGAAG
AACGGCGAGG ATCTGCATGC GGCCGTGAAG CGCGAATGCC TCGCGGTGCG CAACGGCGTC
GGCATTCTCG ACGCGTCGAC GCTCGGCAAG ATCGACATCC AGGGCCCGGA CGCGGTGAAG
CTGCTGAACT GGATGTACAC GAATCCGTGG AACAAGCTCG AAGTGGGCAA GTGCCGCTAC
GGGCTGATGC TCGACGAAAA CGGGATGGTG TTCGACGACG GCGTGACCGT GCGCCTCGCC
GACCAGCATT TCATGATGAC GACCACTACC GGCGGCGCGG CGCGCGTGCT GACGTGGCTC
GAGCGCTGGC TGCAGACCGA ATGGCCCGAC ATGAAGGTGC GGCTCGCGTC CGTCACCGAT
CACTGGGCGA CGTTCGCGGT GGTCGGCCCG AAGAGCCGCA AGGTCGTGCA GAAGGTGTGC
CAGGACATCG ACTTCGGCAA TGAAGCGTTC CCGTTCATGA GCTACCGCAA CGGCACGGTT
GCCGGCGCGA AGGCGCGCGT GATGCGGATC AGCTTCTCGG GCGAGCTGGC CTACGAAGTG
AACGTGCCGG CGAACGCGGG CCGCGCGGTG TGGGAAGCGC TGATGGCGGC CGGCGCCGAA
TTCGACATCA CGCCGTACGG CACCGAGACG ATGCACGTGC TGCGCGCGGA GAAGGGCTAC
ATCATCGTCG GCCAGGATAC CGACGGCTCG ATCACGCCGT TCGATCTCGG GATGGGCGGC
GTCGTCGCGA AGTCGAAGGA CTTCCTCGGC AAGCGTTCGC TGTCGCGCTC GGATACCGCG
AAGGAAGGCC GCAAGCAGTT CGTCGGCCTG CTGACCGAAG ACGAACAGTT CGTGCTGCCG
GAAGGCGCGC AGATCATCGC GAAGGACACG CAGGTGTCGG CGGTCGATCC GACGCCGATG
ATTGGCCACG TGACGTCGAG CTACTACAGC CCGATCCTGA AGCGCTCGAT CGCGCTCGCG
GTGGTGAAGG GCGGCCTGAA CAAGATGGGC GAGAGCGTCG TGATTCCGCT GGCCAACGGC
CGCCGCATCA CCGCGAAGAT CTCGAGCCCG GTTTTCTACG ATACCGAAGG GGTGCGTCAG
CATGTGGAAT GA
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| Protein sequence | MSQKDRLGTG GRINRAIPLT FTFNGRTYQG FQGDTLASAL LANGVHFVAR SFKYHRPRGI
VTADVAEPNA VVQLETGPYT VPNARATEIE LYQGLVATSV NAEPTLENDK YAINQKLSRF
MPAGFYYKTF MWPRNMWPKY EEKIREAAGL GKAPEVLDAD RYDKCYAHCD VLVVGGGPSG
LAAAHAAATA GARVILVDDQ RELGGSLLSC RAEIDAKPAL QWVEKIEAEL RKLPDVTILS
RSTAFGYQDH NLVTVTQRLT DHLPVSMRKG TRELLWKVRA KRVILATGAH ERPIVFGNND
LPGVMLAGAV STYVHRFGVL PGRNVVVFTN NDRAYQTALD LKACGAKVTV VDSRASSNGA
LPAAAKRQGV TVMSGAVVTA ASGKWRVSSI DVASYSNGQT GGKLQTLPCD LVAMSGGFSP
VLHLFAQSGG KACWNDEKAC FLPGKPVQAE ASIGAAAGEF GLARALRLAV DAGVEAAKAA
GFTAAQRPVA PQVAEAVEGA LQPLWLVGSR EAAARGPKQF VDFQNDVAAA DILLAAREGF
ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AGALGKTIPE TGTTTFRPNY TPVSFGTFAG
RETGDFLDPI RKTAVHEWHV EHGAMFEDVG NWKRPWYFPK NGEDLHAAVK RECLAVRNGV
GILDASTLGK IDIQGPDAVK LLNWMYTNPW NKLEVGKCRY GLMLDENGMV FDDGVTVRLA
DQHFMMTTTT GGAARVLTWL ERWLQTEWPD MKVRLASVTD HWATFAVVGP KSRKVVQKVC
QDIDFGNEAF PFMSYRNGTV AGAKARVMRI SFSGELAYEV NVPANAGRAV WEALMAAGAE
FDITPYGTET MHVLRAEKGY IIVGQDTDGS ITPFDLGMGG VVAKSKDFLG KRSLSRSDTA
KEGRKQFVGL LTEDEQFVLP EGAQIIAKDT QVSAVDPTPM IGHVTSSYYS PILKRSIALA
VVKGGLNKMG ESVVIPLANG RRITAKISSP VFYDTEGVRQ HVE
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