Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5110 |
Symbol | |
ID | 6127922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2188498 |
End bp | 2189445 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641652202 |
Product | choline ABC transporter, periplasmic binding protein |
Protein accession | YP_001778730 |
Protein GI | 170737470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.405245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCC TATTGATCGC AGCGGTGTGC GGGATCGGGG TGACCGCGCC GATGTCGGCC GTTTATGCGG CCGATCCGCC CGTGTGCAAG AACGTGCGCT TCGCGGATGT CGGCTGGTCC GACATCGCGG CGACCACGGG CCTCGCGTCG ACGATGCTGC AGGGGCTCGG CTACAACCCG ACGAAGACGA TCGCCTCGGT GCCGATCACG TTCGCGGGGA TCAAGAGCAA GCAGATCGAT GTGTTCCTCG GCTACTGGTC GCCGACGATG GACCCGATCA TCCAGCCGTT CACGAAGGCC GGCACGATCA AGGTGCTCGC GACGCCGAAC CTGACCGGCG CGAAATACAC GCTCGCGGTG CCCGACTACG TGTACCAGGG CGGCCTGAAG TCGTTCGCGG ACATCCAGAA GTACGCGGAC AAGCTCAACG GCAAGATCTA CGGGATCGAG CCGGGCAACG ACGGCAATGC GCTGATCAAG AAGATGATCG ACGGCAATCA GTTCGGCCTC GGCAAGTTCA AGCTGGTCGA GTCGAGCGAG GCCGGGATGC TGGTCGAAGT GAATCGCGCG GCCCGCGACA AGCAGTGGAT CGTGTTCCTT GGGTGGGAAC CGCATCCGAT GAACGTGCAG ATGAAGATCG ACTACCTGAC CGGCGGCGAC GATGTGTTCG GCCCGAACTA CGGCGAAGCG AAGGTGCTGA CGGCAACCCC GCCCGATTAC GCGCAACGCT GCCCGAACGT CGCGAAGTTC GTGTCGAACC TGCAGTTCAC GACGTCGATC GAGAACCACG TGATGGTGCC GATCATGAAC AAGCAGGACC CGAACAAGGC TGCCGCCGAC TGGCTGAAGG CGAACCCGCA AGCGCTCGAC AAGTGGCTGG CCGGCGTGAC GACGCTCGAC GGCAAGCCGG GCCTGCCGGC GGTGAAGGCG TACCTCGGCG TGCATTGA
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Protein sequence | MKRLLIAAVC GIGVTAPMSA VYAADPPVCK NVRFADVGWS DIAATTGLAS TMLQGLGYNP TKTIASVPIT FAGIKSKQID VFLGYWSPTM DPIIQPFTKA GTIKVLATPN LTGAKYTLAV PDYVYQGGLK SFADIQKYAD KLNGKIYGIE PGNDGNALIK KMIDGNQFGL GKFKLVESSE AGMLVEVNRA ARDKQWIVFL GWEPHPMNVQ MKIDYLTGGD DVFGPNYGEA KVLTATPPDY AQRCPNVAKF VSNLQFTTSI ENHVMVPIMN KQDPNKAAAD WLKANPQALD KWLAGVTTLD GKPGLPAVKA YLGVH
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