| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5002 |
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| Symbol | |
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| ID | 6127814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2048160 |
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| End bp | 2052758 |
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| Gene Length | 4599 bp |
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| Protein Length | 1532 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641652094 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_001778622 |
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| Protein GI | 170737362 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0763111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.53255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAA CTGGTCGTGA AGAGTTGTTC AAGGGGATGC TTTTGGGGCA GGACGCCATT
GATCTTATCA ATAAGAGTCC ATTGCTCGTG GATCAAATAA TTAAATACAA TGAAGATGTG
CTGAGTAAGG ATTTGAATCC AATCGAGGTT AGCGCGGGCG AGCGGGGAAT ATTCTGGGAT
CGTGGGCGGC CTGGAATTGT ATTTGGGAAT TATGCTGGCG TGACGTTTGA CAAGCTCGAT
CCACGTGTAT TGGTCGGTAT TTTGAGTCAC GAGATTGGTC ACTATGTCAA TGACGCACGA
GCTCAAGCTC GTGAGCAGTA TCACGCGAAT GAAATGCGAA ACGATTATCA TTTGGCGGCG
ATGGTCGGGG TGATGAAGGA GGCTGAGGCA GCCTATAACA ACTGGTTAGT GGCGCGAGAA
GTCGCGAAAA ATGGTGGTGG CGCGCTTCCT GTACTTGGAG ATCGGCGGGA TCACGTCACG
GCGCCGGGGT TTGATATCAA TGGTGCGTTC ACTAGGGTCT ACGAGGCGAA TGTTGGAAAA
ATGCCTGCCG ATGTGCTAAA GCAGGTCATG CTCGAGGTCG GGGGAAACTA TCTGGCGCGA
GCACATCCTG GGGCAGATCC GGATACGACA TATTATGAGC AAAATGGCGC CGCCTATGGA
GCGTCTGAAA AGCGATTATC TCAATCGCCG GTCATCGGAG TGAGCTATGC GTTGAATCTG
GCAACAGGTT TTATCAAGTC CACGAAGTTG ACTTTCTCCA CGGGTACAGT GCAAGTCAAC
GAGTACAACA ACGGGGTATT GGGTGCCGCA ACGTTATACG GCCCGAACGG TCAGATGACG
GAGTATGTGA AGTACGCAAC GAATGGCATC AAGCTTCAGG AAACTCGCTA TACAGACGAC
GGCCGAATTG CCACCACGCG GACCGACGTC AACGGCGACG GTATCTTCGA CAACATCAAA
ACGGAAACCC TCCTCGCCGA CGGCGCCAGC GTAATCCGCG AAGACATCAA CGGCGACGGC
GTTGTCGATC GCAATTTCGT CGTAAACGGC GGCCAGCGCT ACGACCTGTC CAAGGTCCGC
GATGCCGCCT TTGCCGACAG CTTGCTGTCA CGATATCGCG CGACAGGGCT GCTGAGTGGT
ACGAGCTTCC TCGACCTGAG CCAGATCATT TCCCGCACGC TGACCTATGG CGGTCGAAAC
GACTACGGTT TCACGATGCC GTCCGGCTGG TACAACCCGA TCGGTGCATT CTACGAAGCC
AAAAGCGCTG CATTCGACAA AGCCGCCTCC ATTGCCGACA AGACACCTGT CCTGCTCGAC
GCGAACCGAT GGGGAGTAGG TGTCAGTGCG CTTCAGTCGC GCGACGCGAA CCGCGACGGC
AAACTGACCG GCGCGGAACT GGACGGGCTA CAAGTCTGGA TCGATGCGAA CGAGGACGGT
ATCGGCGACG TCGGTGAATT CAGGTCGCTG GCGCAAGCCG GGATCACCGA GATCCGCGCG
GTCGACTATG ACGTCATCAC GCGGGGTAAC AGCTACCACG CATCGGCACC GGTCGCGGCG
CCGTTGAAAC CCTGGGAAGC ATCGCAACCC GGCCGAATGT ACTTGGCCCC GGCCGTTCCG
CTGTCGAACT ACCGAACGCT GCGCGATAAC GACAAGATCT ACTGGATCAA CTCCAGAGAC
TTCATCATGT TCGGCCCGAC GCAGATCAAG GTCAGTCCTT CCAATCGGAG CTACCTCATC
GGTACCGACG GGAACGACGT ATTCGATGCG AATTACTACG CTGCCTATGG CCACTGGATC
GACAGCAATC TGCTCGTCAA TTTCCTCGCA GGCGACGGCA ACGACATGAT GGGCGGCAGC
AGCCGCAACG ACAATCTGTG GGGCGGCACC GGCAACGACA CGCTGTTCGG CTATGACGGC
GACGACAGGC TGTACGGCGA GGAGGGCGAC GACGAACTCA ATGGGGGTGC CGGCAACGAC
GTGCTCGACG GCGGTATCGG CAACGACAAA CTGTTCGGCC ACGTCGGTAA CGACATCATG
AACGGCGGCG ACGGCGACGA CATCATGCTG GGCTTCACCG CATCGAACGA TAGCAAGCAA
ACATTGGCCT GGGGCGAAAC GGATGACGAC ATCATGTACG GCGGCGCGGG CAACGACCGG
ATGTGGGGTG GCGTCGGCCA CGACTACATG GACGGTGGCG ACGGGGCTGA CTTCGTGAGT
GGCGGGGACG GAAACGATAC GGTGTTCGGC GGCGCGGGGA ACGATGAACT GCATGGTGAT
GCAGGCAACG ACCGGCTTCT TGGAGAGGCC GGCAACGATC GCATTTTCGG CGAGGCCGGG
GACGATGTGC TCTGGGGCGG CGATGGCGAT GACGTGCTGG TCGGCTTCAC TGCCAGCAAC
GATGCGAAGC AAACGTTGTC GTGGGGTGAG TCCGACAACG ACATGCTGTA TGGCGGCAAT
GGCAACGATG CACTGTACGG CGGTCTCGGC AACGACTACC TCGATGGCGG CAACGACAAC
GATTTTCTCG ACGGTGGCGA TGGCGACGAC CGGCTCTTTG GCGGCGCGGG CGACGACGAA
CTGAACGGCG GCAACGGCCA CGATGCGCTT TCGGGGGAAA CCGGTAACGA CAAGATTTTC
GGCGGCGCAG GCAACGACAC GATCTGGGGC GGCGACGGCG ACGATATTCT CGTCGGCTTT
ACGGCCAGCA ATGACGCAAA GCAGTCGCTG GCCGCGTGGG AAACCGATGA CGATACGATC
TACGGCGGAG CCGGAAACGA TCTGATCCTT GGCGGTCTCG GCAACGATCT GCTCCACGGC
GAGGCCGGCA ACGATGAAAT TCAGGGTGGG GACGGCCACG ACAAGCTTTA TGGCGGCGAT
GGCAACGACC GACTGTTCGG CCAGGTCGGA AACGACATCC TGTACGGTGG CGCGGGCGAC
GATTTGCTGG TGGGCTTTAC TGGTGACAAT GAGGCGAAGA GGACACTAGG ACCCGGCGAA
ACCGACGATG ACTATCTCTA TGGTGGAGAA GGCAATGACA CGCTGCTCGG TGGTCTGGGC
GACGACTATC TCGACGGTGG GGCCGGTGCG GATCACATGG AAGGCGGCGA AGGTAACGAT
ACTTATATCG TGAACAGCGT CAATGACGTG GTTCTCGAAT ACGCAAACGA GGGTTACGAC
ACGGTAATCA GCAGCGCAAA CTACATTCTC AACGCCAATA TTGAGGAATT GAGGCTCGTC
GAGGGGTTCA ACATCAACGG CACGGGCAAT GCGCTCGATA ACCGGATCGT CGGCAACAGC
GCAGACAACA TTCTCGATGG CGTTACGGGT GCCGACACGA TGATCGGCGG AAAGGGCAAC
GATACCTACT ACGTCGACAA TGTCGGCGAC CGCGTCGTGG AATTCGCCGG CGAGGGCATC
GATACGGTGC AGAGCAAGAT CAGCTATACG TTGGGCGAAC ACGTCGAGAA TTTGAACCTG
CTGGATTTCG GTAAGCCGGA AAAAGGGCTC GTCGATGGCG TGGCCGTTCA CGTGTACGGG
TACCCGAAAG CCAACGAGCT GGATTACATG CAAGGCGATG CGGTTCCGAG ATTCCAGGGA
ACGTGTGCGC TGACGTCGAT CGCGAATTTG CTTACGCAAA CCGGTACGCC GATTACCGAG
GGGGACGTCG TCCGACGCGC GATCGACAAC CAATGGGCAG TCACCAGCCC GGCGGCGACG
GATTACCAGC GAGGCGGATC GAACTACGTT CAGCAACAGG CACTGCTCGC GAGTTACGGT
ATTGCAAACA ACCTGCTTGC CGGATACGAC GAGCATGCGG TAGCGAATCT CGTCCGCAGT
GGTCGTGGCG TGATACTGGC GCTGAACTCG GGCCGTCTTT GGGAAGACAG CGCTTATCTC
GATGGCGGCG GCGTGAATCA CGTCGTAACC GTGACGGGCG CGGTCTATGG AGACGCAGAT
GGCGAGCTCA AGGGCTTTTA TATTGCGGAC TCAGGCCGCC GGCGCGTCAG CGACATGACG
CGCTACATCA GCCTTCAGGA GTTCCGGGCG GCCGCCAACG TACCGAATGC CTACGCGATC
TACACGGCCG AAGCGCTGAA ACTGTGGAAT GAGGACATCG ACGGCACGGG TAACGCACTC
GATAACACGA TCATCGGCAA CCGCGGCAAC AATGTGCTGG ACGGCGGTGC CGGCAACGAC
ATCCTGATCG GCGGACTGGG CAACGATACC TATCGATTCG GCCGCGGGTC CGGCTGCGAC
ACGATCCGGG ACGACGACGA AACGCTCGGC AACAGCGATG TGATCAGCAT CGGCGCCGGC
GTATCCGCGG ATCAATTGTG GTTTCGTCAC GTCGGCAACG ATCTCGAGAT CAGTATCCTC
GGCACCGGCG ATACCGCAAC GGTTCGGGAC TGGTATCTGG GTTCACGGTA TCAGATCGAG
CAGATCCGTG TCGATGACGG GCGGACGCTC GTTAACGCCG ATGTCGAGAA GCTGGTACAG
GCCATGGCGG TCTGGTCGCC GCCGGCTGCG GGATCAGTAA CGCTGTCTCC TGAGCATCAG
GCCGCGCTTG CGCCGACGCT GGCGACGAGC TGGCGTTAA
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| Protein sequence | MKITGREELF KGMLLGQDAI DLINKSPLLV DQIIKYNEDV LSKDLNPIEV SAGERGIFWD
RGRPGIVFGN YAGVTFDKLD PRVLVGILSH EIGHYVNDAR AQAREQYHAN EMRNDYHLAA
MVGVMKEAEA AYNNWLVARE VAKNGGGALP VLGDRRDHVT APGFDINGAF TRVYEANVGK
MPADVLKQVM LEVGGNYLAR AHPGADPDTT YYEQNGAAYG ASEKRLSQSP VIGVSYALNL
ATGFIKSTKL TFSTGTVQVN EYNNGVLGAA TLYGPNGQMT EYVKYATNGI KLQETRYTDD
GRIATTRTDV NGDGIFDNIK TETLLADGAS VIREDINGDG VVDRNFVVNG GQRYDLSKVR
DAAFADSLLS RYRATGLLSG TSFLDLSQII SRTLTYGGRN DYGFTMPSGW YNPIGAFYEA
KSAAFDKAAS IADKTPVLLD ANRWGVGVSA LQSRDANRDG KLTGAELDGL QVWIDANEDG
IGDVGEFRSL AQAGITEIRA VDYDVITRGN SYHASAPVAA PLKPWEASQP GRMYLAPAVP
LSNYRTLRDN DKIYWINSRD FIMFGPTQIK VSPSNRSYLI GTDGNDVFDA NYYAAYGHWI
DSNLLVNFLA GDGNDMMGGS SRNDNLWGGT GNDTLFGYDG DDRLYGEEGD DELNGGAGND
VLDGGIGNDK LFGHVGNDIM NGGDGDDIML GFTASNDSKQ TLAWGETDDD IMYGGAGNDR
MWGGVGHDYM DGGDGADFVS GGDGNDTVFG GAGNDELHGD AGNDRLLGEA GNDRIFGEAG
DDVLWGGDGD DVLVGFTASN DAKQTLSWGE SDNDMLYGGN GNDALYGGLG NDYLDGGNDN
DFLDGGDGDD RLFGGAGDDE LNGGNGHDAL SGETGNDKIF GGAGNDTIWG GDGDDILVGF
TASNDAKQSL AAWETDDDTI YGGAGNDLIL GGLGNDLLHG EAGNDEIQGG DGHDKLYGGD
GNDRLFGQVG NDILYGGAGD DLLVGFTGDN EAKRTLGPGE TDDDYLYGGE GNDTLLGGLG
DDYLDGGAGA DHMEGGEGND TYIVNSVNDV VLEYANEGYD TVISSANYIL NANIEELRLV
EGFNINGTGN ALDNRIVGNS ADNILDGVTG ADTMIGGKGN DTYYVDNVGD RVVEFAGEGI
DTVQSKISYT LGEHVENLNL LDFGKPEKGL VDGVAVHVYG YPKANELDYM QGDAVPRFQG
TCALTSIANL LTQTGTPITE GDVVRRAIDN QWAVTSPAAT DYQRGGSNYV QQQALLASYG
IANNLLAGYD EHAVANLVRS GRGVILALNS GRLWEDSAYL DGGGVNHVVT VTGAVYGDAD
GELKGFYIAD SGRRRVSDMT RYISLQEFRA AANVPNAYAI YTAEALKLWN EDIDGTGNAL
DNTIIGNRGN NVLDGGAGND ILIGGLGNDT YRFGRGSGCD TIRDDDETLG NSDVISIGAG
VSADQLWFRH VGNDLEISIL GTGDTATVRD WYLGSRYQIE QIRVDDGRTL VNADVEKLVQ
AMAVWSPPAA GSVTLSPEHQ AALAPTLATS WR
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