| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5000 |
|---|
| Symbol | |
|---|
| ID | 6127812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2046764 |
|---|
| End bp | 2047426 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641652092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001778620 |
|---|
| Protein GI | 170737360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00613195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC GTCAGGGGTC GAGGTGGCGT GCCTGTTCCA AGGAACAAGA GGAGAGAGAG
GGTTATGGGC CGGGGCGAGA GGAGGCGGGG AGTGACACTG AGCCCACGAA CATCTTTGGC
CTAATGATCA GAATTTATCG AATGAGTCCC GCGCTCTTGG CTTTGCATCT GTCTGGTGTG
GCGATTGCTT GGTTTACGCC GGATGACGCG TTGTCTCGTT GGCCATTTCT GAAGATGGCG
GTAGCTAACG TTGGAGAGAT ATTCCCTTTG CTACCAGAGG CGGTGAAGAA ATCCAGGTTT
CCCGACGTGA CGGCGCTGTA TTTTTTTCTG ATGTTGGTCG CGATTCCGAT GAGGCTTTCG
GTAGGGATTC GCTTTTGTTA TTCGTATCGA CCTCGGATCG AGAGTGAGTA TTCGAAAATT
TCTATCGCGA AGAAGATTTA CTTGATTGTT GTTGTCTTGA TGTTTATGTG TATGGGATTT
CATTCGATTT TGATTGAAGG ATATTTCTAT GAGTGGAATT TTGTTGCAAT AAGCCGGTCG
CGCATATGGC TGGGTTTGAT TGGACCGTTT TTTGCGGGTG GGGCTGAGGT TATCGCTATC
GCGGCTGGCG TGGTTGCAAT TTTCATTGCA TTGCGCCGCG TCTTTACTTG TAAAGGGGGG
TAG
|
|---|
| Protein sequence | MKERQGSRWR ACSKEQEERE GYGPGREEAG SDTEPTNIFG LMIRIYRMSP ALLALHLSGV
AIAWFTPDDA LSRWPFLKMA VANVGEIFPL LPEAVKKSRF PDVTALYFFL MLVAIPMRLS
VGIRFCYSYR PRIESEYSKI SIAKKIYLIV VVLMFMCMGF HSILIEGYFY EWNFVAISRS
RIWLGLIGPF FAGGAEVIAI AAGVVAIFIA LRRVFTCKGG
|
|---|
| |