| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4963 |
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| Symbol | |
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| ID | 6127775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1996398 |
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| End bp | 1998290 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641652050 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001778583 |
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| Protein GI | 170737323 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0115166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCT CGATCGCCAC CGTCTCCCTG TCCGGCACGC TCGCCGAGAA GCTCGCCGCC
GTCCAGGCCG CGGGCTTCGA CGGCGTCGAA ATCTTCGAAA ACGACCTCGT CTACTTCGAC
GGATCGCCGG CCGACGTCCG GCGCATGGCC GCCGATCTCG GCCTCGACAT CGTGCTGTTC
CAGCCGTTTC GCGACTTCGA GGGCGTGAGC GCGGCTCAGC TCGCGCGCAA TCTCGACCGG
ATCAAGCGCA AGTTCGACGT GATGCATGCG CTCGGCACCG ACCGCATCCT CGTCTGCAGC
AGTGTGGCGG CCGATACGAT CGCCGACGAC GGGTTGCTCG TCGACCAGCT CGGCGTGCTC
GCCGAAGCCG CCCGGCAGGC CGGCGTGGTG GCCGCGTACG AAGCGCTCGC GTGGGGCCGC
GTCGTGAAGC GGTACGGCCA CGCGTGGAAG CTCGTGAACG CGGTGAACAG CCCGCACCTC
GGCCTCGCGC TCGACAGCTT CCACACGCTG TCGCTCGACG ATTCGCCGGA CGGGATCGCC
GATATCCCCG GCGACCGGAT CGCGTTCGTG CAGATCGCCG ACGCGCCGAA GCTCGTGATG
GACGTGCTCG AATGGAGCCG CCACTACCGC TCGTTCCCGG GCCAGGGCGA CTTCGACCTG
GCGCGCTTCA CCGCGCGCGT GATCGAGTCG GGCTATACGG GCCCGCTGTC GCTCGAGATC
TTCAACGACG GCTTCCGCGC GGCGCCGACC GCGCTCACGG CCGCCGACGG CCATCGCTCG
CTGCTCTATC TGGAAGACCT GACGCGCGCG CGGCTCGCGC AGGAGGGCCG CGCGCCGGCC
GCCAGCCAGC CGCTGTTCGC CCCGCCCGCG CCGCCCGCGC ACGTCGGGTT CCAGTTCATC
GAATTCGCGG TCGACGCACA GGCGGCGGCC ACCGTCGGCG AATGGCTCGG CCGGATGCGC
TTCCGGCTCG CCGGCCGGCA TCGCTCGAAG GACGTGACGC TGTTCCAGCA CGGCGCCGCG
TCGATCGTAC TCAACGCCGA GCGCGACTCG TTCGCCGATG CGTTCTTCCA GCAGCACGGG
CTGTCGCTGT GCGCGTCCGC GTTCCGGGTC GACGACGCGA ACGTGGCGTT CGAACGCGCG
GCCGGCTTCG GCTATGCGCC GTTCTCCGGC CGGGTCGGGC CGAACGAGCG CGTGCTGCCG
AGCGTGAAGG CGCCGGACGG CAGCCTCGAA TATTTCGTCG ACGAAGCGCC GGATACGCCG
ACGCTGTATG AATCGGACTT CGTGCTGACC GACATCGACG GCCCGACCGA GGTCGGCCCG
CTGACGGGCA TCGATCACGT GTGCCTCGCG CTGCCGGCCG ACGCGCTCGA CACGTGGATC
CTGTTCTTCA AGACGGCGTT CGGCTTCGAG GCCGAGCGCA GCTGGCTCGT GCCCGACCCG
TACGGGCTGA TGCGCAGCCG CGCGGTGCGC AGCGCCGACG GCTCGGTGCG GATCGCGCTG
AACGCGTCGG TCGACCGTCA CACGGCCGTT GCCGAATCGC TCGACCGCTA CCACGGCACC
GGGCTGAACC ACGTCGCGTT CCGTACCGAC GACATCGTCA AGACGGTCGC CGCGTTCGCG
GCCGACGGCG TGCCGTTCCT GCGCATTCCG GCCAATTATT ACGACGATCT CGCCGCGCGC
TACGCGCTGC CGGACGAGCT GATCGACACG CTGAGCGCGC ATCACCTGCT GTACGACCGC
GACGAGCACG GCGGCGAATT CCTGCATGCG TATACGGAAC TGGTCGACAA CCGCTTCTCG
CTCGAGATCG TCGAACGGCG CGGCGGGTAC GACGGCTACG GCGCGGCGAA TGCGGCCGTG
CGGCTCGCCG CGCAGGCGCA GCGGCGAAAA TAA
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| Protein sequence | MQRSIATVSL SGTLAEKLAA VQAAGFDGVE IFENDLVYFD GSPADVRRMA ADLGLDIVLF
QPFRDFEGVS AAQLARNLDR IKRKFDVMHA LGTDRILVCS SVAADTIADD GLLVDQLGVL
AEAARQAGVV AAYEALAWGR VVKRYGHAWK LVNAVNSPHL GLALDSFHTL SLDDSPDGIA
DIPGDRIAFV QIADAPKLVM DVLEWSRHYR SFPGQGDFDL ARFTARVIES GYTGPLSLEI
FNDGFRAAPT ALTAADGHRS LLYLEDLTRA RLAQEGRAPA ASQPLFAPPA PPAHVGFQFI
EFAVDAQAAA TVGEWLGRMR FRLAGRHRSK DVTLFQHGAA SIVLNAERDS FADAFFQQHG
LSLCASAFRV DDANVAFERA AGFGYAPFSG RVGPNERVLP SVKAPDGSLE YFVDEAPDTP
TLYESDFVLT DIDGPTEVGP LTGIDHVCLA LPADALDTWI LFFKTAFGFE AERSWLVPDP
YGLMRSRAVR SADGSVRIAL NASVDRHTAV AESLDRYHGT GLNHVAFRTD DIVKTVAAFA
ADGVPFLRIP ANYYDDLAAR YALPDELIDT LSAHHLLYDR DEHGGEFLHA YTELVDNRFS
LEIVERRGGY DGYGAANAAV RLAAQAQRRK
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