Gene Bcenmc03_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4958 
Symbol 
ID6127770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1991030 
End bp1991467 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID641652045 
ProductDoxX family protein 
Protein accessionYP_001778578 
Protein GI170737318 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00723227 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCGTA CCGTCGATTC CGGCGTCATT TTTTTCGCAC GCCTGGCGCT GGCGGCGTTG 
TTCTTGTGGG GCGGCATCAT GAAGCTGCTC GGCTACAGCG ACTTCATCGC GTATCTGCAC
GGGATGAACG TGCCCTATCA ACAGGTCGTC GGGCCGATCG TCGTCGCGAT CGAGGGGCTG
GGCGGGCTGC TGCTGATCGT CGGCTACAAG GTCCGGCCGC TCGCGTTGCT GATGGCGGTC
TACACGATCG CGACCGCGAT GGTCGGGCAC AATTTCTGGG ACGCGACGAA CGCCGCCGTC
CAGCACGACA TGGTGATTCA CTTCTGGAAG AACGTCGCGA TCGCCGGCGG GTTCCTGCTG
CTGTTCGTCA CCGGCGCCGG CGGCGCGAGC ATCGACGCGC TGCGCCGGCC GAGTTCGTCG
TACGGCGTGC TGCGCTGA
 
Protein sequence
MTRTVDSGVI FFARLALAAL FLWGGIMKLL GYSDFIAYLH GMNVPYQQVV GPIVVAIEGL 
GGLLLIVGYK VRPLALLMAV YTIATAMVGH NFWDATNAAV QHDMVIHFWK NVAIAGGFLL
LFVTGAGGAS IDALRRPSSS YGVLR