Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4957 |
Symbol | |
ID | 6127769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1990386 |
End bp | 1990841 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641652044 |
Product | RbsD or FucU transport |
Protein accession | YP_001778577 |
Protein GI | 170737317 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.590537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00748515 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTGAAGA ATCTCGACCC GCTGCTGCAC GCCGACATCC TGCACACGCT GCGCGCGATG GGCCACGGTG ACGAAATCGC GATCTGCGAT GCGAATTTCC CGGCGGAATC CGTCGCGGAG CACACGGTGG TCGGGCGCGC GTTGCGGGTC GACGGCGCCG ATTCGGCGCG CGTCGTGCGC GCGGTGCTGT CGGTGCTGCC GCTCGATACG TTCGTCGACA CGCCCGCGTG GCGGATGGAA GTCGTCGGCG ACGCGGCCGC GGTGCCGCCC GTGCAGCGCG AAGTGCAAGC CGAGATCGAC CGCGCGGAAG GGCGTGCGGT GCCGCTGACC GGCGTCGAAC GTTTCGCGTT CTACGAGCGT GCGCAGCAGA CGTATGCGGT GATCGTCACC GGCGAAACGC GCGGCTACGG CTGCTTCATT TTCAAGAAAG GCGTGCTGTT GAGCGACGCG GGCTAA
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Protein sequence | MLKNLDPLLH ADILHTLRAM GHGDEIAICD ANFPAESVAE HTVVGRALRV DGADSARVVR AVLSVLPLDT FVDTPAWRME VVGDAAAVPP VQREVQAEID RAEGRAVPLT GVERFAFYER AQQTYAVIVT GETRGYGCFI FKKGVLLSDA G
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