Gene Bcenmc03_4957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4957 
Symbol 
ID6127769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1990386 
End bp1990841 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID641652044 
ProductRbsD or FucU transport 
Protein accessionYP_001778577 
Protein GI170737317 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.590537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00748515 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGAAGA ATCTCGACCC GCTGCTGCAC GCCGACATCC TGCACACGCT GCGCGCGATG 
GGCCACGGTG ACGAAATCGC GATCTGCGAT GCGAATTTCC CGGCGGAATC CGTCGCGGAG
CACACGGTGG TCGGGCGCGC GTTGCGGGTC GACGGCGCCG ATTCGGCGCG CGTCGTGCGC
GCGGTGCTGT CGGTGCTGCC GCTCGATACG TTCGTCGACA CGCCCGCGTG GCGGATGGAA
GTCGTCGGCG ACGCGGCCGC GGTGCCGCCC GTGCAGCGCG AAGTGCAAGC CGAGATCGAC
CGCGCGGAAG GGCGTGCGGT GCCGCTGACC GGCGTCGAAC GTTTCGCGTT CTACGAGCGT
GCGCAGCAGA CGTATGCGGT GATCGTCACC GGCGAAACGC GCGGCTACGG CTGCTTCATT
TTCAAGAAAG GCGTGCTGTT GAGCGACGCG GGCTAA
 
Protein sequence
MLKNLDPLLH ADILHTLRAM GHGDEIAICD ANFPAESVAE HTVVGRALRV DGADSARVVR 
AVLSVLPLDT FVDTPAWRME VVGDAAAVPP VQREVQAEID RAEGRAVPLT GVERFAFYER
AQQTYAVIVT GETRGYGCFI FKKGVLLSDA G