Gene Bcenmc03_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4948 
Symbol 
ID6127760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1982351 
End bp1982722 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID641652035 
ProductPilT domain-containing protein 
Protein accessionYP_001778568 
Protein GI170737308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.651261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.006546 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCCTTG TCGACACGTC CGTCTGGATC GATCACTTGC GAGGCGGCGA CGCCACGCTC 
ACCGCCTTGC TGGAAGCGGA GCGCGTATTG ATCCATCCGT TCATCGTCGG CGAGCTTGCG
CTCGGCAGCA TGCGCAATCG CGAGACCGTG CTGGATGCGC TGCGCGACCT TCCAGCTGCA
ACCCTTGCCA CCGACGACGA AGTCCAGCGC ATGATCGATG CCGTACCGCT TCACGGGCTG
GGCATCGGCT ACGTCGATGC CCACCTGCTT GCGTCGGCCA GACTGACCAG CGACAGCAGG
CTATGGACGC GCGACCGGCG CCTGCTGGCG GCAGCGGAGC GCCTGCAACT CGTCGCCCGC
CCCGCTCACT GA
 
Protein sequence
MILVDTSVWI DHLRGGDATL TALLEAERVL IHPFIVGELA LGSMRNRETV LDALRDLPAA 
TLATDDEVQR MIDAVPLHGL GIGYVDAHLL ASARLTSDSR LWTRDRRLLA AAERLQLVAR
PAH