Gene Bcenmc03_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4942 
Symbol 
ID6127754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand+ 
Start bp1975552 
End bp1976178 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID641652029 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001778562 
Protein GI170737302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.774081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.20679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG TCGCCTGGCT GCCGTTCATG GCCACCTCCC TTCTGATCAT TCTGACGCCC 
GGCCAGGACA TGGTCCTCGT GATGTCGCGC ACGCTGTCCG GCGGCACGCG CGCGGGCCTC 
GTGACTGCCG CGGGTGTCAG CGTCGGGCTG CTCGTGCATA CGATGCTCGC GACGCTCGGG 
CTGGGTGCGC TGCTTCAGGC TTCCGAATGG CTGTTCACGG CGCTGAAAGT GGTGGGCGCG 
CTGTACCTGC TGTACCTCGG CATCACGCTG TTGCGCTCGA CGGGGGAATT GACGCTGGCG 
GGCAATGGCA CTGCGCCGGC ATCGCGGCTG CGGACGTTCG CGCAAGGCGC GCTGTCCAAC 
GTGTCGAATC CGAAGGTCGC GCTTTTCTAC CTGGCGTTTC TGCCGCAATT CGTTCCGGCC 
GGCGCGCCGC ATCCGATGCT GTCGCTGTTC GTGCTGGGCG CGACGTTTGC CGGGCTGACG 
TTTCTCGTCA AGGGGCCGGT CGCGCTGTTC GCGGGCCTGC TGTCGGCATC GATCCGCCGC 
AACCCGCGCA TCCTGACGCG CATGCATCGC GTCAGCGGGG TGGTCTTGCT CGCGCTGGGC 
GTGAAGCTGG CGCTCGAACG CCGCTGA
 
Protein sequence
MSHVAWLPFM ATSLLIILTP GQDMVLVMSR TLSGGTRAGL VTAAGVSVGL LVHTMLATLG 
LGALLQASEW LFTALKVVGA LYLLYLGITL LRSTGELTLA GNGTAPASRL RTFAQGALSN 
VSNPKVALFY LAFLPQFVPA GAPHPMLSLF VLGATFAGLT FLVKGPVALF AGLLSASIRR 
NPRILTRMHR VSGVVLLALG VKLALERR