| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4920 |
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| Symbol | |
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| ID | 6127732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1952256 |
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| End bp | 1953797 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641652007 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001778540 |
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| Protein GI | 170737280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.31782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACT TGCACAACAC GAACGGCCTG ATGCGCTTCG CGAAGGTGGC GGCCGCGAGC
ACCCTGCTCG CGACGCTGCT CGCCGCGTGC GCGGTCGGCC CCGACTACAA GCGTCCGGAC
GCGGCGGCGC CCGTCGCGTT CAAGGAAGCG CCGACCCTCG CCGCCGGCGA GCAGGCCGGC
ACATGGAAGA CGGCCGAGCC GGCGGACGGC GAACATCGCG GCGAATGGTG GAAGGTGTTC
GGCGACCCGG TGCTCGATTC GCTCGAGACG CAGGCGCTCG CCGCGAACCA GAACCTGAAG
GCCGCGGCCG CGCGGGTCGA GGAGGCGCGT GCGGCGACCC GGTCGGCGCG CTCGCAATGG
TTCCCGCAGG TCGGCGCCGG TTTCGGGCCG ACGCGCGAGG GGCTGTCGTC GGCGTCGCAG
TTCCAGCCGC AAGGCACCGG CCCGACCAAC GCGACGCTGT GGCGCGCGCA GGGAACGGTG
TCGTACGAAG CCGACCTGTT CGGCCGCGTC GGCCGCAACG TCGAGGCGTC GCGTGCCGAC
CAGGCGCAGA GCGAAGCGCT GTTCCGCTCG GTGCAGCTTG CGTTGCAGGC CGACGTCGCG
CAGAACTACT TCGAACTGCG TCAGCTCGAT TCGGATCAGG ACCTGTACCG CCGCACGGTG
GAGTTGCGCG AGCAGGCGCT GAAGCTCGTG CAGCGCCGCT TCAACGAAGG CGACATCAGC
GAGCTCGACG TGTCGCGCGC GAAGAACGAA CTGGCGAGCG CGCAGGCCGA TGCGGTCGGC
GTCGCGCGCC GGCGCGCGGC GTCCGAGCAT GCGCTGGCCA TTCTGCTCGG CAAGGCGCCT
GCGGATTTCG CGTTCAAGGA AACGCCGATC GTGCCGGTCG CGGTGAAGAT TCCGCCGGGC
TTGCCGTCCG CGCTGCTCGA ACGCCGCCCG GACGTGTCGG CGGCCGAACG CGCGATGGCG
GCCGCGAACG CGCGGATCGG GCTCGCGAAG TCGGCGTACT TCCCGAAGCT CGATATCACC
GGGTCGTTCG GCTATGAAGC GTCGACGCTC GGCAACCTGT TCCTGTGGTC GAGCCGCACG
TTCCTGCTCG GGCCGTTCGC CGGCACCGCG CTGACGCTGC CGCTGTTCGA CGGCGGGCGT
CGGGCTGCTG GCGTGCAGCA GGCGCGCGCG CAGTACGACG AGCAGGTCGC GAACTACCGG
CAGCAGGTGC TCGTCGCGTT CCGTGAGGTC GAGGACAATC TTGCTGATCT GCGTTTGCTC
GATGATCAGA TCCGTGCGCA GGATGCGGCC GTCAACGCGT CGCGTCGGGC GGCGACGTTG
TCGCGCACGC AATATCAGGA AGGTGAGGTT GCGTATCTGG ATGTGATCGA CAGCGAGCGG
TCGGTGCTGC AGTCGCAGTT GCAGGCGAAC CAGTTGACGG GGGCGCAGGC GGTGTCGACC
GTCAACCTGA TCCGCGCGTT GGGCGGCGGG TGGGGGAATG CGCCGGCGCC GACGGCGGTG
GGTGATGCGG CGTCTGGCAA GGCTGACGTA GCTGCGCGGT AA
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| Protein sequence | MNNLHNTNGL MRFAKVAAAS TLLATLLAAC AVGPDYKRPD AAAPVAFKEA PTLAAGEQAG
TWKTAEPADG EHRGEWWKVF GDPVLDSLET QALAANQNLK AAAARVEEAR AATRSARSQW
FPQVGAGFGP TREGLSSASQ FQPQGTGPTN ATLWRAQGTV SYEADLFGRV GRNVEASRAD
QAQSEALFRS VQLALQADVA QNYFELRQLD SDQDLYRRTV ELREQALKLV QRRFNEGDIS
ELDVSRAKNE LASAQADAVG VARRRAASEH ALAILLGKAP ADFAFKETPI VPVAVKIPPG
LPSALLERRP DVSAAERAMA AANARIGLAK SAYFPKLDIT GSFGYEASTL GNLFLWSSRT
FLLGPFAGTA LTLPLFDGGR RAAGVQQARA QYDEQVANYR QQVLVAFREV EDNLADLRLL
DDQIRAQDAA VNASRRAATL SRTQYQEGEV AYLDVIDSER SVLQSQLQAN QLTGAQAVST
VNLIRALGGG WGNAPAPTAV GDAASGKADV AAR
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