| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4908 |
|---|
| Symbol | |
|---|
| ID | 6127720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1936047 |
|---|
| End bp | 1937516 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651995 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001778528 |
|---|
| Protein GI | 170737268 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG TTCAGGAAAC CCTGGCACTG AAAGATCCGT CGCTGTTCCG CCAGCAGGCG
TACGTCAACG GCGAATGGCA AGGCGCCACG AACGGCGAGA CGTTCGAGGT CCGCAACCCG
GCCACCGGCG GCCTGCTCGG CACCGTGCCG GCGATGGGCA CGGCGGAAAC GCGTCACGCG
ATCGACGCCG CGAACGCCGC ATGGCCGGCG TGGCGCAAGA AGACCGCGAA GGAGCGTGCG
GTCATCCTGC GCAAGTGGCA TGACCTGATG ATGGACAACG CCGACGACCT CGCGCTGATC
CTGACGACCG AGCAGGGCAA GTCGCTGGCC GAAGCGAAGG GCGAGATCGG CTACGCGGCG
TCGTTCCTCG AATGGTTCGC GGAAGAAGGC AAGCGCGTGT ACGGCGACAC GATCCCGACG
CCGGCGAGCG ACAAGCGCAT CGTCGTGACG AAGGAAGCGA TCGGCGTATG CGCGGCGATC
ACGCCGTGGA ACTTCCCGGC GGCGATGATC ACGCGCAAGG TCGGCCCGGC GCTCGCGGCA
GGCTGCCCGA TCGTCGTGAA GCCGGCGGAA GCGACGCCGT TCTCCGCGCT CGCGATGGCC
GTGCTGGCCG AACGCGCGGG CGTGCCGGCC GGCGTGTTCA GCGTCGTCAC GGGCGACCCG
AAGGCGATCG GCGGCGAGCT GACGTCGAAC CCGATCGTGC GCAAGCTGTC GTTCACGGGC
TCGACGCCGG TCGGCCGCCT GCTGATGGCG CAGTGCGCGG CGACGGTCAA GAAGGTGTCG
CTGGAGCTTG GCGGCAATGC GCCGTTCATC GTGTTCGACG ACGCCGATCT CGATGCGGCC
GTGCAGGGCG CGATCGCGTC GAAGTACCGC AACAGCGGCC AGACGTGCGT GTGCACGAAC
CGCTTCTACG TGCACGAAGC GGTGTACGAC CAGTTCGCGC AGAAGCTCGC GGCGGCCGTC
GGCCAGTTGA AGGTCGGCCG CGGCACGGAG CCGGGCGTCA CGCAAGGCCC GCTGATCAAC
GAAGCGGCCG TGCTGAAGGT CGAGGCGCAC ATCGAGGACG CGCTCGCGAA GGGCGCGACC
GTCGTGACGG GCGGCAAGCG CCACGCGCTC GGCCACGGCT TCTTCGAGCC GACCGTGCTG
ACGGGCGTCA CGCCGGCGAT GAAGGTCGCG AAGGAAGAGA CGTTCGGGCC GCTCGCGCCG
CTGTTCAAGT TCGGCAGCGA CGACGAGGTG ATCCGCCTCG CGAACGACAC CGAGTTCGGC
CTCGCCGCGT ACTTCTACAG CCGCGACATC GGCCGCGTGT GGAAGGTGGC CGAAGCGCTC
GAATACGGGA TGGTCGGCGT GAACACGGGC CTGATCTCGA ACGAAGTCGC GCCGTTCGGC
GGCGTCAAGC AATCGGGCCT CGGCCGCGAA GGCTCGCACT ACGGCATCGA CGACTACGTC
GTGATCAAGT ACCTCTGCCT GGCCGTCTGA
|
|---|
| Protein sequence | MSTVQETLAL KDPSLFRQQA YVNGEWQGAT NGETFEVRNP ATGGLLGTVP AMGTAETRHA
IDAANAAWPA WRKKTAKERA VILRKWHDLM MDNADDLALI LTTEQGKSLA EAKGEIGYAA
SFLEWFAEEG KRVYGDTIPT PASDKRIVVT KEAIGVCAAI TPWNFPAAMI TRKVGPALAA
GCPIVVKPAE ATPFSALAMA VLAERAGVPA GVFSVVTGDP KAIGGELTSN PIVRKLSFTG
STPVGRLLMA QCAATVKKVS LELGGNAPFI VFDDADLDAA VQGAIASKYR NSGQTCVCTN
RFYVHEAVYD QFAQKLAAAV GQLKVGRGTE PGVTQGPLIN EAAVLKVEAH IEDALAKGAT
VVTGGKRHAL GHGFFEPTVL TGVTPAMKVA KEETFGPLAP LFKFGSDDEV IRLANDTEFG
LAAYFYSRDI GRVWKVAEAL EYGMVGVNTG LISNEVAPFG GVKQSGLGRE GSHYGIDDYV
VIKYLCLAV
|
|---|
| |