Gene Bcenmc03_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4887 
Symbol 
ID6127699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1911466 
End bp1912662 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content61% 
IMG OID641651974 
Productmajor facilitator transporter 
Protein accessionYP_001778507 
Protein GI170737247 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT CATCTTCTTC ATTCGTTTCC TCGCCGCGCC AGACAGGAAG CGCGGTAGGC 
GCCATGGCGC TGTGTGTGGC GATGCTGATC GCCTCGGAGT TCATGCCGGT CAGCTTGCTG
ACGCCGATTG CGCATGACTT GAATGCAACC GAGGGCATCG CTGGTCAGGC GATCTCGATT
TCCGGTTTCT TCGCCGTCCT GGCCAGCTTG TTCGTCGCGC CGCTCGCCGG GCGTTTCGAT
CGTCGGCATG TGTTGATGAG CATGACGGTT CTGATGCTGA TATCGATCGT GCTGATCGCC
GTGTCGCCGA ACTTCGCGGT GCTGATGATT GCGCGGGCGT TCCTGGGGCT TGCGGTCGGA
GGTTTCTGGT CGTTGTCCAC AGCCACGGTG ATTCAACTGG TACCGGCACA ACGCGTACCC
AAGGCGCTCG GAACGATCTA TATGGGTAAT GCGATCGCGA CAGCCTTTGC TGCTCCGATT
GGCGCGTACG TCGGTGGCCA TTTGGGTTGG AGATTCGTAT TTGCTGCGCT GGTGCCTTTG
GTACTGGTGA ATCTAGTATG GCAAGCGGTA AGCCTGCCGA GCATGCCCCC CCGAGCAGCC
ATTCCCATCA CCCGGTTGTT CGGACTGCTG AAGCGCCGAA ACGTTGCGGT CGGAATGGTT
GCGGTCATGC TCACCTTCGC CGGCTCCTAC GGGACGTTCA CCTACTTCCG TCCGTTTCTG
GAAGCGGTAA CCGGAGCAGA CGCCAATCAA CTGTCGATGC TATTGCTCGG ATTGGGCGTG
GCCGGTTTTG CTGGGACCCA TTTCGCGGGC ACGATGCTGC ACCGCAACCA TGTTTACCCT
CTGTTGCGCT GGTTGCCGAT TGCGCTCGCC GCCGCGACGC TGGGATTGGT GCAGTTCGGC
CACCTGTTCG CGGGCGCCGC GACGATGATG ATCGGCTGGG GCGCCGTGAA TGCAGCGATT
CCCGTCACGT GGTCCACCTG GCTGGCGAAG GAAATCGACG ACGAGCCCGA AAGCGGTGGG
GGCTTGATGG TCGGATCGAT TCAGCTGGCG ATCATGCTGG GCGGCGCGCT AGGGGGAGAA
CTCCTCGATC GCATCGGCGT GTTCGCTCCG TTGATGGGCG GGGTCGTGTT GCTCGTTCTT
TCGGCATTGC TCATTGGTAA TGGTGCGCGC CTGAAGAAGA CCGAAAAGCT CGACTGA
 
Protein sequence
MTPSSSSFVS SPRQTGSAVG AMALCVAMLI ASEFMPVSLL TPIAHDLNAT EGIAGQAISI 
SGFFAVLASL FVAPLAGRFD RRHVLMSMTV LMLISIVLIA VSPNFAVLMI ARAFLGLAVG
GFWSLSTATV IQLVPAQRVP KALGTIYMGN AIATAFAAPI GAYVGGHLGW RFVFAALVPL
VLVNLVWQAV SLPSMPPRAA IPITRLFGLL KRRNVAVGMV AVMLTFAGSY GTFTYFRPFL
EAVTGADANQ LSMLLLGLGV AGFAGTHFAG TMLHRNHVYP LLRWLPIALA AATLGLVQFG
HLFAGAATMM IGWGAVNAAI PVTWSTWLAK EIDDEPESGG GLMVGSIQLA IMLGGALGGE
LLDRIGVFAP LMGGVVLLVL SALLIGNGAR LKKTEKLD