Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4865 |
Symbol | |
ID | 6127677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1888793 |
End bp | 1889668 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641651952 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001778485 |
Protein GI | 170737225 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.321588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG TCTGGTTGGT AACGGGGGCC GCACGCGGCC TCGGGCGAGC GATTTCGGAA GCGGTGCTGG CGGCGGGCGA CCGGCTGGTG GCGGGCGCCC GCGATCCGGC GCGACTGGCC GATCTGGCCG AACGGTATGG CGACCGGCTG CTGCCGGTCG AACTCGACGT CACCGACGAA GCGGCGGCCG CGCAGGCCGT CTCGGCGGCA CGCGCGGCGT TCGGCCGCAT CGACGTGCTG GTGAACAACG CGGGCTACGG CCACACGGCG CCGTTCGAGC AGATGAGCGC CGACGCTTTC CGCGACCAGA TCGAAACGAA CCTGTTCGGC GTGATCAACC TCACGCGCGC GGTGCTGCCG ACGATGCGCG CGCAGCGCGC GGGGCACATC TTCCAGGTGT CGTCGGTCGG CGGGCGCACG TCGACGCCCG GATTGTCCGC GTATCAGGCC GCGAAGTGGG CGGTCGGCGG GTTCAGCGAC GTGCTCGCGA AGGAAGCCGC GCCGTTCGGC GTGCGCGTGT GCACGCTCGA GCCGGGCGGG ATGCGCACCG AATGGGCCGC GCAGGCGAAG CGCGGCGTCG ACGATCTGCT GCCCGACTAT CAACCGTCGG TCGGCAAGAT TCTCGACCTG CTCGGTGCGT ATGGCGGCCA CGAGATCGGC GACCCCGCAC GCATCGCGGC GCTGATCGTC GACCTGTCGC GCCGCGACGA CGTGCCGCTG CGTTTGCTGC TCGGCGGCGA TGCGCTGTTC GTCTGCGAGC AGGCAGAGCG GCAGCGTGCG GAAGAGGCGG CGCGGTGGCG GGACGCCACG CTGTCGACGC AGTTTCCGGA TGCGAAGCTG CCGGACGGGC TCGATGCGTT GAAGGTGATC GAGTAA
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Protein sequence | MSKVWLVTGA ARGLGRAISE AVLAAGDRLV AGARDPARLA DLAERYGDRL LPVELDVTDE AAAAQAVSAA RAAFGRIDVL VNNAGYGHTA PFEQMSADAF RDQIETNLFG VINLTRAVLP TMRAQRAGHI FQVSSVGGRT STPGLSAYQA AKWAVGGFSD VLAKEAAPFG VRVCTLEPGG MRTEWAAQAK RGVDDLLPDY QPSVGKILDL LGAYGGHEIG DPARIAALIV DLSRRDDVPL RLLLGGDALF VCEQAERQRA EEAARWRDAT LSTQFPDAKL PDGLDALKVI E
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