Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4845 |
Symbol | |
ID | 6127657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1869801 |
End bp | 1870583 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641651932 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001778465 |
Protein GI | 170737205 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA TTCTTGCGGC TGTGACCGTG GCCCTGCTCG CCGTATCGGC CGGCAGTGCA TACGCGAAGG ACTGGTCGAC CGTGCGGTTC GGCGTCGACG CAAGCTACCC GCCTTTCGAA TCGAAAGGCG CCGACGGCAA GGTGGTCGGC TTCGACGTGG ATCTCGGCAA CGAGATCTGC CGCCGCATCA ACGCGAAATG CGTGTGGATC GAAAACGACT TCGACGGGAT GATCCCGGCG CTGAAGGCCC GCAAGTTCGA CGGCGTGCTG TCGTCGATGT CGATGACGCC GGCCCGCGCC GAACAGATCG CGTTCTCGTC GAAGCTGTTC AACACGCCGA CGCGCCTCGT CACGAAGAAG GGCGCGAACC TGCAGCCGAC GGCCGAATCG CTGAAGGGCA AGTCGGTCGG CGTCGAGCAG GGCACGATCC AGGAAACCTA CGCGAAGGCG CACTGGGCGT CGAAGGGCGT GAACATCGTG CCTTACCAGA ACCAGGACCA GGTCTACGCC GACCTGATCT CCGGCCGTCT GGACGGCGCG CTGCAGGACG CGGTGCAAGC CGAGATCGGC TTCCTGAAGA CGCCGCGCGG CGCGAATTTC GACTTCGCCG GCAAGGACCT CGACGATCCG AAGACGCTTG GCAACGGCGC CGGCATCGGC CTGCGCAAGG AAGACACCGA CCTGAAGGCG AAGATCGACG GCGCGATCGC CGGCATGCGC AAGGACGGCA CGTACGACAA GCTCGCGAAG AAGTACTTCG ATTTCGACGT CTACGGCAAG TAA
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Protein sequence | MKKILAAVTV ALLAVSAGSA YAKDWSTVRF GVDASYPPFE SKGADGKVVG FDVDLGNEIC RRINAKCVWI ENDFDGMIPA LKARKFDGVL SSMSMTPARA EQIAFSSKLF NTPTRLVTKK GANLQPTAES LKGKSVGVEQ GTIQETYAKA HWASKGVNIV PYQNQDQVYA DLISGRLDGA LQDAVQAEIG FLKTPRGANF DFAGKDLDDP KTLGNGAGIG LRKEDTDLKA KIDGAIAGMR KDGTYDKLAK KYFDFDVYGK
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