| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4838 |
|---|
| Symbol | |
|---|
| ID | 6127650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1861844 |
|---|
| End bp | 1864117 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651925 |
|---|
| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
|---|
| Protein accession | YP_001778458 |
|---|
| Protein GI | 170737198 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.982435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATTGCT ATACGCTGGC GCGGCGGCCG ATCTGTGCCG CGCTGTTCGG CGCGTTCGGC
CTGTCCGCCG CCCCGGCTCA CGCCGATTCG TCGCCGCAAG GCGCCACCCC GCCTTCCGCC
GTCCTGACCG CCGCCGCCGC GTCCGCGCGC GGCGAGGCGG CGCTACTCGA CCCCGTCACC
GTCACGGCCA CCCGCACCGC CACCGCGGCG AGCCGCACGG CGGCGTCCGT GTCGGTGATC
ACCGACGAGG ATCTCGAAGA GCAGCAGGCC ACCAACATCA AGGACGCGCT GCGCTACGAG
CCGGGCATCA CCGTGCGCCG CACCGCGTAC CGGCCCGGCA GCGCCGCGCT CGGCGGCGGC
CGCGACGGCG ATTCGAGCAT CAACATCCGC GGCCTCGAAG GCAATCGCGT GCTGCTGATG
GAAGACGGCA TCCGCCTGCC GAACGCGTTC TCGTTCGGGC CGCTCGAAGC GGGCCGCGGC
GACTACGCCG ATCTCGACAC GCTCAAGCGC ATCGAGATCC TGCGCGGGCC GGCGTCGGCG
CTGTACGGCA GCGACGGCCT GACCGGCGCG GTGAACTTCA TCACGAAGGA CCCGCGCGAC
CTGCTGTCGA TCTACGGCAA GCCCTACTAC TTCTCGTTCC GGCCGAGCTA CGACTCGACC
GACCGCAGCA TCGGCGCGAC GGTGTCGGCC GCGGGCGGCA ACGATCGCAT CCAGGGGATG
ATCATCGCCG ACGGCCGGCG CGGCCACGAG GTCGACACAC GCGGCGACAA CAACTCGGCG
AGCACGCTGC GCACGACGTC GAACCCGCAG GACGTGTATT CGGAATCGCT GCTCGGCAAG
CTCGTGCTGA CGCCGACCAC ACGCGACACG ATCAAGTTCA CCGCCGAAAC GGTGCAGCGG
CGCGTGAGCA CCGACGTGCT GTCGGCGATC AATGCGCCGG CCACGCTCGG CCTCACGACC
CACGACCGGC TCGAGCGCAA CCGCTTCAGC GTCGACTACG ACTTTCGCGA CGACGCATTC
CGCTGGTTCC AGACCGCACA CGTGCAGTTC TACTACCAGG ACGCGAAGCA GGATCAGTAC
GCGTTCGAGA CGCGCGGCAG GCTACCCTCG CGTTCGCGCG ACAACGAGTA CAAGGAACGC
ACGTTCGGCG GCGCCGCGTT CGCCGAAAGC GGCTTTTCGA CCGGCCCGCT CGCGCACAAG
CTGCTCTACG GCGTCGACGG CAGCCTGTCG CGCGTGACGA ACCTGCGCGA CGGCACGGTG
CCGGGCGTCG GCGAAGCGTT CCCGAACAAG GCGTTTCCCG ACACCGACTA CACGCTGTTC
GGCGCGTTCG TGCAGGACCA GATCGGCTAC GGCCGCCTGC TCGTCACGCC GGGCCTGCGC
TTCGACACGT ACCGGCTGAG CCCGACCGAA AACGATCCGC TGTTCACCGG CAAGGCCGTG
TCGACGAGCG CCAACGAGCT GTCGCCGCGC GTCGCCGTGC TCTACGAGAT CACGCCCGCG
GTCATTCCGT ACGTGCAGTA CGCGCACGGC TTCCGCGCGC CGACGCCCGA CCAGGTGAAC
AGCAGCTTCT CGAACCCGGT GTACGGCTAC ACGTCGATCG GCAATCCGAA CCTGAAGCCC
GAAACCAGCG ACACGTTCGA AGCCGGCCTG CGCGGCAAGG CCGGCACCGG CTACGGCGTC
GTGCGCTACA GCGCGGCCGC CTTCACCGGC CGCTACCGCA ACTTCATCTC GCGCACGACG
ATCGCCGGCA GCGGCCGGCC GGTCGACCCG TTCGTGTTCC AGTACGTGAA CTTCGCCGAC
GCGCGCATCC ACGGCCTCGA AGGCCGCGCC GAATGGGTGA TGCCGAACGG CATCACGCTG
AAGACGGCGA TGGCGTTCAC GAAGGGCTCG ACGCAGAACG ACGGCGCGGC GAGCCAGCCG
CTCAATACCG TGAACCCGTT CTCGGCCGTG TTCGGCGTGC GGTACGAGCC GACCGAACGC
TGGTTCGTGC AGACCGACCT GCTGTTCCAG GCCGCCAAAC GCGACAAGGA CGTCGACAAG
TCCGACTGTT CGAACAAGGC GTGCTTCACG CCGCCGTCGT CGTTCGTCGT CGACCTGCGC
GGCGGCTATC GCTTCAACAA GCACGTGAGC GCGACGATCG GTATCCGCAA CCTGTTCGAC
CGCAAGTACT GGAACTGGTC GGACGTGCGC GGCATCGCGG CCGATTCGCA GGTGCTCGAC
GCGTATTCGT CGCCCGGCCG CACGGTCGCC GTCAGCATGA AAGTGGATTT CTGA
|
|---|
| Protein sequence | MHCYTLARRP ICAALFGAFG LSAAPAHADS SPQGATPPSA VLTAAAASAR GEAALLDPVT
VTATRTATAA SRTAASVSVI TDEDLEEQQA TNIKDALRYE PGITVRRTAY RPGSAALGGG
RDGDSSINIR GLEGNRVLLM EDGIRLPNAF SFGPLEAGRG DYADLDTLKR IEILRGPASA
LYGSDGLTGA VNFITKDPRD LLSIYGKPYY FSFRPSYDST DRSIGATVSA AGGNDRIQGM
IIADGRRGHE VDTRGDNNSA STLRTTSNPQ DVYSESLLGK LVLTPTTRDT IKFTAETVQR
RVSTDVLSAI NAPATLGLTT HDRLERNRFS VDYDFRDDAF RWFQTAHVQF YYQDAKQDQY
AFETRGRLPS RSRDNEYKER TFGGAAFAES GFSTGPLAHK LLYGVDGSLS RVTNLRDGTV
PGVGEAFPNK AFPDTDYTLF GAFVQDQIGY GRLLVTPGLR FDTYRLSPTE NDPLFTGKAV
STSANELSPR VAVLYEITPA VIPYVQYAHG FRAPTPDQVN SSFSNPVYGY TSIGNPNLKP
ETSDTFEAGL RGKAGTGYGV VRYSAAAFTG RYRNFISRTT IAGSGRPVDP FVFQYVNFAD
ARIHGLEGRA EWVMPNGITL KTAMAFTKGS TQNDGAASQP LNTVNPFSAV FGVRYEPTER
WFVQTDLLFQ AAKRDKDVDK SDCSNKACFT PPSSFVVDLR GGYRFNKHVS ATIGIRNLFD
RKYWNWSDVR GIAADSQVLD AYSSPGRTVA VSMKVDF
|
|---|
| |