Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4831 |
Symbol | |
ID | 6127643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1854562 |
End bp | 1856691 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651918 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001778451 |
Protein GI | 170737191 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.982435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATC CCACCGCCAA CCCGTCGCCG CCGCCCGCGC CGCCATCCAC ACCGCCGCGC CGCCGTCGCA TCTGGCGCAC GCTCGCGGGC GCGCTGCTCG GCCTGACGCT CGCGTGCGCG GGCATCGGCG CATGGACGAT CGATCGCATC TGGACGCAGT TGCCGTCCGT CGAACACCTG GCCGTCTATC GTCCCGCTTT GCCGCTGCGG ATTTTCTCGC GCGATGGTGA CCTGCTGGCC GAATACGGCG TCGAGCGGCG CGAGTTCGTG CCGCTCGAAC GCATCCCGCC GCTGATGCGG CATGCGCTGC TCGCGGCCGA GGACGCGAAG TTCTACGAAC ACGGCCCGGT CGACATCGGT GGCCTTGCGC GCGCGACGTT CGCGAACGTC GTGACGGGCC AGCCGGGGCA GGGAGGCAGC ACGATCACGA TGCAGGTCGC GCGCAACTTC TACCTGACGC GCGACAAGGT GCTGAGCCGC AAGCTCGCCG AGATCCTGAT GGCCGCCAAG CTCGAGCGCG AATACAGCAA GGACAAGCTG CTCGAGCTGT ACATGAACGA GATCTATCTC GGCGAGCGCG CCTACGGCTT CGCGGCCGCC GCGCACGTGT ACTTCGGCAA GCCGCTCGAC GCGCTGAGCG CGGGCGAGGC GGCCGTGCTC GCCGGGCTGC CGAAGGCGCC GTCCGCATTC AATCCGGTCG TCAACCCGGC GCGCGCGACC GCGCGGCGCA ACTACGTGCT CGGCCGGATG CATGCGCTTG GCCAGCTCGA CGAGGCGACG TATCGCGCGG CCGTCGACGC GCCGATCGCA TTGGCGACCA CGCCGCCGCC CGGCATCGTC GCGGCGCCGT ACGTCGCCGA GCGGGCGCGC CGGATGATGG TCGAACGGTT TCATGACGAC GCGTACACGC TCGGCCTCGA CGTGACGACG ACGATCTCGA TGCGCGACCA GCGCGCGGCC GAAGCCGCAC TCGACCGTAC GCTGAGCCGC CAGTCCCGCG CGAAGCGCGA TATGCGCAAC GGTCTCGAAG GCGCACTCGT GTCGCTCGAT GCGGCCACCG GCGACATGCT CGCGCTGGTC GGCGGCGCGG ATTTCGATCG CAACGTGTTC GACCATGCGC TGCAGGCGTA TCGCCAGCCG GGGTCGAGCT TCAAGCCGTT CGTCTATTCC GCGGCGCTGG AGAAGGGCTA CTTCCCCGGC GTGCTCGTCG ACGATACGCA GCGCACACTC ACGCACGCGG AAACCGGCGC GCGGCCGTGG CGTCCGCGCA ATTTCGGCAA TCGCTACGAA GGCTTCATCC CGGTGCGGCG CGGGCTCGTG CGCTCGAAGA ACCTGGTCGC GGTCAGCCTG ATGCAGGCCA CCGACGCGCG CTACGTGCAG CAGCACGCGG TGCATTTCGG CTTCGACGCG CAGCGCAATC CGGCGTCGCT GCCGCTCGCG CTCGGCGCGG GCGCCGTGAC GCCGCTCGAA CTCGCGAGCG CGTACAGCGT GTTCGCGAAC GGCGGGACGC GGATGGAGCC GCGCCTGATC CTGTCAGTGA AGCAGCGTCA CGGCGGCGCG ATGTACGAGG CGACCGTGCC GGCGGGCGAG CGGGTCGTAT CGGCGCGCAA TGCGTTCGTG ATGGACAGCA TGCTGCGCGA CGTCGTACGG GCCGGTACTG CACGCGGCGC GCTCGCGCTC AGGCGTGACG ACGCGGCCGG CAAGACGGGC ACGTCGAACG GATCGAAGGA CGTATGGTTC GCCGGCTATT CGTCGGGCAT CGTCGCGGTT GCGTGGCTCG GCTACGACAC GCCGCGCCCG ATGGGGCGCG CGACCGGCGC GACGCTCGCG CTACCGGTCT GGCTCGACTA CATGAAGACG GCCGTCGACG GGCGCACGCC GGTCGCTGCG ACGCCGCCGC AGGACGTCGC GCTGGTGGAC GGCGATTTCG TCTACGCCGA ATACACGCGC GGCACGTGCA CGGCCGACGT GCCGGCGTAT ATCCGCAGTC GCTTTGCATG CGGCGGCGCG GTGGCCGGCG ATGCACCGGA TGCGCCTGGC GATAACGGCA AGCGCGATGA ACCGATGCCC GCCGCCGTCG ACGCGGCCGA GCGCGAACGC GTGCTCGACC TGTTCCGGAC CGATGACTGA
|
Protein sequence | MTDPTANPSP PPAPPSTPPR RRRIWRTLAG ALLGLTLACA GIGAWTIDRI WTQLPSVEHL AVYRPALPLR IFSRDGDLLA EYGVERREFV PLERIPPLMR HALLAAEDAK FYEHGPVDIG GLARATFANV VTGQPGQGGS TITMQVARNF YLTRDKVLSR KLAEILMAAK LEREYSKDKL LELYMNEIYL GERAYGFAAA AHVYFGKPLD ALSAGEAAVL AGLPKAPSAF NPVVNPARAT ARRNYVLGRM HALGQLDEAT YRAAVDAPIA LATTPPPGIV AAPYVAERAR RMMVERFHDD AYTLGLDVTT TISMRDQRAA EAALDRTLSR QSRAKRDMRN GLEGALVSLD AATGDMLALV GGADFDRNVF DHALQAYRQP GSSFKPFVYS AALEKGYFPG VLVDDTQRTL THAETGARPW RPRNFGNRYE GFIPVRRGLV RSKNLVAVSL MQATDARYVQ QHAVHFGFDA QRNPASLPLA LGAGAVTPLE LASAYSVFAN GGTRMEPRLI LSVKQRHGGA MYEATVPAGE RVVSARNAFV MDSMLRDVVR AGTARGALAL RRDDAAGKTG TSNGSKDVWF AGYSSGIVAV AWLGYDTPRP MGRATGATLA LPVWLDYMKT AVDGRTPVAA TPPQDVALVD GDFVYAEYTR GTCTADVPAY IRSRFACGGA VAGDAPDAPG DNGKRDEPMP AAVDAAERER VLDLFRTDD
|
| |