Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4762 |
Symbol | |
ID | 6127574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1783871 |
End bp | 1784923 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651849 |
Product | porin |
Protein accession | YP_001778382 |
Protein GI | 170737122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.821427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.658294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGGA AAGCATTCCT GGTCGGCGCG TGCGTGCTGT GCACGACGTC GGCGCACGCG TCGTCGGTCA CGCTGTACGG GATCGTCGAC AGCTACGTCG AATTCGATCG CATCGGCAGT CTATCGAGCA TGCGGCAAAG CGGCGGTGGC GCGTCGACGA GCCGCTTCGG CCTGACGGGC GTCGAGGATC TCGGCGGCGG CACGTCGACG AAATTCGTGC TGGAAAGCGG CTTCTCGCCG GCCGACGGAT CGTTCCAGGG CGGCACGCTG TTCTACCGGC AGGCGTACGT GTCGCTGCGG AACACGCGTT ACGGCGACCT GCGGCTCGGC CGGCAATACA CGCCCGCGTT CTACGTCGTG TACGACGGCG ATCCGTTCGG ACTCAACGAA CGGCTGTCGC CGCTCGCGCT GCTCGCCACG TCGACCGACA CGATCACGAG CAACACGACG CCACCGATTC CGCGCTTCAA CCAGGCGGCG TCGTACCTGA GCCCCGACTG GAACGGCCTG CGCGTGATGG CCACGTACGG CTTTCCGACG CCGAACGCGC TCTCGACGCA GGCTGGACGC AACTACGGCG CCGGGCTGCA GTACCGGATC GGCGGACTGT ATGTCGGCGC CGGCTTCCAG GGCGATACGT CGGCCGGCAA CCTCGCACCC GTCATCTCCC CGTCGACGAC CCGCCACTAC GTGTTCGCGG CCAACTACGC GTTCGCGCGC GTCAAGCTGT ACGCCGCGTT CCTGTACGGC GTCGGCACGG CCGCGCGCCT GCCCGCGTTC TCGACCGCGA GCGTCGGCGC GTCGATCAAC GTCGGTGCGC TCGATCGCGT GCTCGTGTCG GTGGTGCGCC GCGACGTGAA GGGCTCGGCG AACGACGCGA CCGCGCTCGG CGTCGGCTAC GACCATCCGC TGTCGAAGCG GACCTCGCTC TACGCCCGCT ATCTCTACAT GAAGAACGGC GGCGATGCCC GCAATACCGT CGTCGCCGGC CTGCAGCCGC AACCGGGCGG CACCGAGCAG GTGTTCGCGC TCGGCATCGT TCACCGCTTC TGA
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Protein sequence | MQRKAFLVGA CVLCTTSAHA SSVTLYGIVD SYVEFDRIGS LSSMRQSGGG ASTSRFGLTG VEDLGGGTST KFVLESGFSP ADGSFQGGTL FYRQAYVSLR NTRYGDLRLG RQYTPAFYVV YDGDPFGLNE RLSPLALLAT STDTITSNTT PPIPRFNQAA SYLSPDWNGL RVMATYGFPT PNALSTQAGR NYGAGLQYRI GGLYVGAGFQ GDTSAGNLAP VISPSTTRHY VFAANYAFAR VKLYAAFLYG VGTAARLPAF STASVGASIN VGALDRVLVS VVRRDVKGSA NDATALGVGY DHPLSKRTSL YARYLYMKNG GDARNTVVAG LQPQPGGTEQ VFALGIVHRF
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