| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4704 |
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| Symbol | |
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| ID | 6127516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1715055 |
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| End bp | 1718273 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641651791 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001778324 |
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| Protein GI | 170737064 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.818119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGTA AATTTGTTTC AAGCATGGTA TTGCATGTGG GAGCGCGCGA GCTGTATAAG
GTTTCCGTCG TTCTTGCGAC GGTCGCTGGC GGTGGGTGTG GCGTCCTGTT CTCTTCTGCT
GCGTATGCAC ATAATCCATA TATCGGATAT GAAACCCCGG TGGCCAGTAA CTGCATAAAT
AGCGGCGTGC TATTCGAAAA TTGTGCTAGA TGGGATAATT CAAATTATAG GGGTGTGCGT
GGGGCGCATT TTTCCCAGAT GGCGGGCCGG TATTTTTCTT ATCTTACTTC CGGAAATGGG
GCTGACACAT ATTTGTGGTC GGGAGTATGG GCGGGAAGTA AATCAGCCGG GCTGTTTTAT
GGGGACGATC CGTTCAGGGC GAATCGGATC GTTGTCGATG CCGAAGGAAC GACCATTGCC
GGCAATCGGC TTGTGTTGTC TTCCAGGGCG GGAATCAGCG TTTCGGGTTC TAGAGTCTCC
AACGTCAAGA ACGGCGGCAG CGCCGGTGAT GCAGTCAACG TCAACCAGCT TTCGCGGGTG
GCGAACGTGC TTGGCGTGAA GATCGACACC AACGGCTACG TAACGACGCC GACATATCGA
GTCGGCGGAA AATCATTCGA CAACATCGCG GATGCGATCG CGGCGGCCGC CGATAGCGGT
ACGGATCCGA ATGCAGTTGT TTATGACGAT TTCGCAAAGC GTTCGATCAC GCTTGACATG
AAGGGCACGA CACTGAAAAA CGTGGCGGCC GGCACGGTCA GCGCGACGAG TATGGAAGCG
ATAAACGGTT CGCAATTGCA CCGTGCGTCA CAGAATGTAG CGACGGCGCT GGGAGGCGGT
TCGACGGTGG ACACGGCAGG TAACTTGACG GCGCCGAAGT ATCGCGTCGG TGACAAAACC
TACGGTAACG TCGGCGACGC GATCGCGGCA GCCGCAGACA GTGGCGGCGG TATGGATCCG
AATGCGGTGG CGTACGACGA TGCCGCCGGG AGCACGATAA CGCTGCGTGG CGAGCATGGC
ACGGCGTTGA AGAACGTCGC GGCAGGCAGT GCGGATACCG ATGCGGTCAA TGTGGGACAA
TTGACTGCTG CTACGCAGCC GATACGAGAT GAGCTGGCTG ACGTCAGCCT TGCGATGAAG
TCCATCCAAA TCAAGCCGCA AGGTGTAGAC GCGATCGCGG CGGGAACGAA TGCCGTTGCA
GTTGGCGCCG GTGCAAATGC GATGGCGAAC GGCTCGATCG CTTTGGGTGC TGGTTCGCGC
GTGACCGGAC TCAATTCGGT CGCGATCGGT ATCAACTCGG TCGCGCTGGA AACAAATCAA
GTGTCGGTGG GCGACGTGGG GCGCGAGCGC CGCATTTCGA ACCTGGCGGC TGGTACGAAA
GGTACCGACG CAGTCAACTT GAATCAGCTG TCTGATGCGA TCGGGAAGGT CTCGAGCCGT
ACCGACAAGC TCTCGTTCGA TCTGGACTCG CGGCGCAGCT TGCTGATTGC CGATCCCTTT
GCCATGGACG AGCAACGTGT GTCGAATTTC GTGCTGATCG ACGGCCAGGG CGCTGACGGT
AGCCTGCCGA ACGCGGCGAG TATCGCCGAC GGCGATCCGG CGAGTACGAC CTCGGCCGCA
ATCGGTATCG GGTCAGTTGC ATCGGGCGCA GATACGATTG CCATTGGCAT GCGTACCATC
GCGAACTCGG ACAACTCCGT CGCGATAGGC AATATGGCCC AAACAGGTTC CGAGCAGCCG
TACTCGGTGG CGATCGGATC GCATGTGACG ACGAACGGCG CGAGTGCACT TGCAATCGGT
TCGCAGGCGA GGGCGAACGG CGAGAACGCG ATCGCTGTCG GCAATAACAA TGTGCACGCG
ATCGGGGAGA GTTCGATTGC AATCGGCAAT GGCGCTGAGG CCGTGGTGGG CGCGACGAAT
GGCATTGCGC TGGGCACGGG GGCGAGCGTT GCCCGAAACG TGACAGACGC GATGGCGCTC
GGCGCGAAAG CCTTTGTGGA AAAAAGGGCG AACGGCGCCG TGGCACTGGG GGCGGGTTCC
CAGGCGAGCC GAGCCAATAC CATTTCAGTG GGCAATGCTG GAAGCGAGCG CCAGATCGTG
AACGTTGCGG CGGGCACGCA AGGTACCGAC GCAGTGAATG TGGCGCAGTT GCAGGGCGCG
GCTGCGAGTC TTGCGAGCGT GATCGGAGGT GACACGACCG TCGATGGAAG CGGCCACGTT
GCCATTCACT CGATTGAAGT GAGCGGTCAC AAGTACGCAA CGGTATCGGC GGCGGTGCAG
GCGGCTGCGG CTTATGGCGC CACGGACTCG CTGGCGGTGC GCTACGATCT CGACTCGCAC
GGCAATCCGA ACTATGGCTC CGTGACGCTC GGCGGCCCAT CGGCAGCACC GGTGATGCTG
ACCAACGTTG CCGATGGCAA GAGCCGATAC GACGCAGTGA ACTATGGCCA GTTGTCGTCG
CTGCAAAGCG ATTTCGAAAA CCGAATGGGC GCGATGGATG ATCGCGTCAG CAAGATCGAA
ACAGATACCG GCGATTCGCG CGATGATAGT CGGGTCATGA CGATGGCCAA TCTGCGCCGT
GACAATAACG ACATCGGGAC CGGCTCAGGC TCCGTTATCA ATAGCGATGC CGGCGACACC
ACGGCAATCG GTGCGAATTC GACGCAGCAA GCGTCGAGCG GGACAGCGAT CGGCGCCGGG
GCGGATGCAC GTGCAATCAA TAGCACTGCG ATCGGGCAAG CTGCATCGGC TCACGGCGAG
AACAGCACAG CGGTCGGCCA GGGCGCGACG GCTTGGGGCA ATAACAGCAT TGCAATTGGT
GCAGGTTCCG TGGCTGACGC GGATAACGCC GTCTCGTTTG GCAACAGCGC TACGGGCATG
ACGCGCACGC TGACCAACGT ATCGGCCGGT GTCGCACCGA CGGATGCCGT CAACGTCCAA
CAACTCGACG AATCGGTGGG CGGCTTGCGA TCGCAGATCG AACACGATCG TGCAGATGCA
AATGGAGGCA CCGCGTCAGC CGTGGCCATT GCGTCGCTGC CGCAAGCGCC GGCGCCCGGA
AAGAGCGTCG TCGCCGTGGG GGGCGGCACG TACGCCGGCC AGTCTGCTCT TGCGGTGGGT
CTGTCCACCT ACGCTGGGCG CTGGATCATC AAGGCTTCTG GCTCGACGAA CACACGAGGA
ACTGTGGCAG GCGGCGTCGG CGCTGGTTTC GTGTGGTAG
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| Protein sequence | MRCKFVSSMV LHVGARELYK VSVVLATVAG GGCGVLFSSA AYAHNPYIGY ETPVASNCIN
SGVLFENCAR WDNSNYRGVR GAHFSQMAGR YFSYLTSGNG ADTYLWSGVW AGSKSAGLFY
GDDPFRANRI VVDAEGTTIA GNRLVLSSRA GISVSGSRVS NVKNGGSAGD AVNVNQLSRV
ANVLGVKIDT NGYVTTPTYR VGGKSFDNIA DAIAAAADSG TDPNAVVYDD FAKRSITLDM
KGTTLKNVAA GTVSATSMEA INGSQLHRAS QNVATALGGG STVDTAGNLT APKYRVGDKT
YGNVGDAIAA AADSGGGMDP NAVAYDDAAG STITLRGEHG TALKNVAAGS ADTDAVNVGQ
LTAATQPIRD ELADVSLAMK SIQIKPQGVD AIAAGTNAVA VGAGANAMAN GSIALGAGSR
VTGLNSVAIG INSVALETNQ VSVGDVGRER RISNLAAGTK GTDAVNLNQL SDAIGKVSSR
TDKLSFDLDS RRSLLIADPF AMDEQRVSNF VLIDGQGADG SLPNAASIAD GDPASTTSAA
IGIGSVASGA DTIAIGMRTI ANSDNSVAIG NMAQTGSEQP YSVAIGSHVT TNGASALAIG
SQARANGENA IAVGNNNVHA IGESSIAIGN GAEAVVGATN GIALGTGASV ARNVTDAMAL
GAKAFVEKRA NGAVALGAGS QASRANTISV GNAGSERQIV NVAAGTQGTD AVNVAQLQGA
AASLASVIGG DTTVDGSGHV AIHSIEVSGH KYATVSAAVQ AAAAYGATDS LAVRYDLDSH
GNPNYGSVTL GGPSAAPVML TNVADGKSRY DAVNYGQLSS LQSDFENRMG AMDDRVSKIE
TDTGDSRDDS RVMTMANLRR DNNDIGTGSG SVINSDAGDT TAIGANSTQQ ASSGTAIGAG
ADARAINSTA IGQAASAHGE NSTAVGQGAT AWGNNSIAIG AGSVADADNA VSFGNSATGM
TRTLTNVSAG VAPTDAVNVQ QLDESVGGLR SQIEHDRADA NGGTASAVAI ASLPQAPAPG
KSVVAVGGGT YAGQSALAVG LSTYAGRWII KASGSTNTRG TVAGGVGAGF VW
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