| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4685 |
|---|
| Symbol | |
|---|
| ID | 6127501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1690244 |
|---|
| End bp | 1690792 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641651776 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001778309 |
|---|
| Protein GI | 170737049 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000615742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000000547421 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGC TGATTTTGGC AATTGCTGCC AGTGCATGTG CAATGTCCGC GTATGCGGCA
AATCCGGAGC CGATCGATCT CAAAGTCCAG CTCGCCGGTG AAGTCCCGCC GCAGGGCGTC
TTTGAAGTAA CTCCAGTCGG CTGGGCAAGT GGTGAGGAGG CCAAGTTTGA TATTCCGGAG
GATTGGGATG GCGGTGTGCG GTATAGAGCA TTTCCGTTTC AGGTGAAAAG TAACTATGGC
GCTATTCATA TGAAGTTGTC AGCGACTTCT GGTGGAACTT CAATGACCTC TACCGATTCG
TGGCGTTTCT TGGGCGAAGA TGGAACCTCG AAGCTCGGTG TAAAGCGACA GGTGATTATT
GCCGGTAAGA CGGCTTGGGA ATGGGTGGAT CAAGCGAAAA TGGAGGTCGC AAGTAAAGAA
CTCGCAGCAA AGGGTAGTGA AGTCAAATTG CAGCTGGGCT TCTATTTTGA CAATACCATT
CCCGTGAAAA AGGGCATCTC CTATACAGGG ATTGCGTCTG TGGTCTTTGA GACGGATCTC
GATGGGTAA
|
|---|
| Protein sequence | MKKLILAIAA SACAMSAYAA NPEPIDLKVQ LAGEVPPQGV FEVTPVGWAS GEEAKFDIPE
DWDGGVRYRA FPFQVKSNYG AIHMKLSATS GGTSMTSTDS WRFLGEDGTS KLGVKRQVII
AGKTAWEWVD QAKMEVASKE LAAKGSEVKL QLGFYFDNTI PVKKGISYTG IASVVFETDL
DG
|
|---|
| |