Gene Bcenmc03_4678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4678 
Symbol 
ID6127494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1681948 
End bp1683072 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID641651769 
Productflagellar P-ring protein 
Protein accessionYP_001778302 
Protein GI170737042 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000218644 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCAA CCCGACTAAC AATCCGTGCC GCCGCCCTGG CTATCGTAAT CGGCATCGCG 
CTAAGCAGCA CAATTGAGGC GCACGCTCAG ACCGTCGGTA ACCTGGTCGA CGTAGAGGGG
GTACGTGAGA ATGCGCTTGT CGGCTACGGT ATCGTGGTTG GCTTGGCCGG ATCGGGTGAC
GGCACGCAAG CCAAGTACAC CACCCAATCG CTGACGAATA TGCTCAAGCA ATTTGGCACG
CGGCTGCCGG AAAATATCAA CCTGCGTTCG CGCAACGCGG CCGCGGTGAT AGTGAGTGCG
ACTTTCCCGC CTGGCTATCG CCGCGGCCAG AAAGTGGACG TGACTGTTTC ATCGCTCGGT
GATGCGAAGA GCTTGCGCGG CGGAACACTG CTGATGACCC CCTTGCGTGC CGCGGACGGC
GACGTCTATG CGCTAGCGCA AGGCAATCTG GTGATTCCAG GTCTGAATGT GCAAGGGCGC
AGCGGCACCA GTGTCACCAT CAATACGCCC ACCACGGGCC GGATTCCTAA GGGTGCAACG
ATCGAGCGGG AGATTGCCAC CGATTTCGCC GATACGCCTA CCGTACGCTT GAACCTAAAA
CGTCCGGATT TCCAGACAGC CTCCAGTATC GCCGACGTTA TCAACAACGC ACTCGGCAGC
GAAGTCGCCA GCACGGTGGA CGCTACCTCG GTGGATGTCG TTGCCCCCCA GGTGCCGAGC
CAGCGCGTGG CGTTCGTTGC CCGCCTGAAC GCGCTGAAGG TGAGTAAAGG CGCAGAGGTG
CCGCGCGTTG TCTTTAACTC GCGCACCGGT ACGGTCGTTA TCAGTCAGGG AGTGACGGTC
AAACCGGCCG TCGTCTCGCA CGGTTCGCTG AAGGTTACGA TCGCCGAAGG CACGATGGTC
AGCCAGCCGA ACGCATTCGC CAACGGCAGT ACCGTGACAG CGCCCGTTAG CGAGATCGGG
GTGACGCAGG CGGGCGGCAA TGCGTTTCAG TGGACATCGG GCGCTAGCCT GCAAGCGATC
GTCGACACGA TCACCCGCAC CGGTGCCACG CCGGATGACC TGATGGCGAT CCTGCAAGCC
CTTTCCGAAG CTGGCGCGCT GACGGGGGAC CTGGTGGTGA TCTGA
 
Protein sequence
MKPTRLTIRA AALAIVIGIA LSSTIEAHAQ TVGNLVDVEG VRENALVGYG IVVGLAGSGD 
GTQAKYTTQS LTNMLKQFGT RLPENINLRS RNAAAVIVSA TFPPGYRRGQ KVDVTVSSLG
DAKSLRGGTL LMTPLRAADG DVYALAQGNL VIPGLNVQGR SGTSVTINTP TTGRIPKGAT
IEREIATDFA DTPTVRLNLK RPDFQTASSI ADVINNALGS EVASTVDATS VDVVAPQVPS
QRVAFVARLN ALKVSKGAEV PRVVFNSRTG TVVISQGVTV KPAVVSHGSL KVTIAEGTMV
SQPNAFANGS TVTAPVSEIG VTQAGGNAFQ WTSGASLQAI VDTITRTGAT PDDLMAILQA
LSEAGALTGD LVVI