Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4641 |
Symbol | |
ID | 6127458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1648780 |
End bp | 1649421 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641651733 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001778266 |
Protein GI | 170737006 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.169112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.068024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGCC GCGTTGTACT CGCAGACGAC CATCCGATCA TGCTGCTCGG CTGCCGCATT CTGATCGAGC AGGGCGGCCT GGAGGTCGTG GGGGAAGCTC GCGACTCCAG GGAATTGATG TCGATCCTGG CACGCGTCGC GTGCGATGTC GTGATCACGG ATTTCTCGAT GCCTAACACT GGACGTGTCG ACGGCTTGCC TATGCTGTCG ATGATTCGAC GAGAGCACGT AGCCTTACCG GTCATCGTGC TTACGAACAT GGCAAATGCC GGGCTGTTAC GCGCTATGTT GAACGAAGGT GTCCTGGGTA TCGTCGAGAA AGGAGCGGAA AGGAACGAAC TGTTCGCTGC CGTACGTGCC GCCCTGAGAG GGGCAGTCTA CATCAGTGCC AAGCTGCAGT TCGAACTGTC GAAGCTCGGG CTGACCGAAA CGGAAAGCCG GCGTGCCGCT AATTTGACTC CTCGAGAGCT CGAAGTATTG CGCCTTCTCG GCAGCGGTAA ATCACCGGCC GAAGTCAGCC AGATTCTCCA TCGGACAATT AAAACGGTCA GTTGGGCCAA GATATCGGCA AAGCGCAAGC TCGGCCTCAA AAGCGATGCC GAACTCTACG AGTACGTCGC CAATCTCGGT CTCAACGGTT GA
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Protein sequence | MACRVVLADD HPIMLLGCRI LIEQGGLEVV GEARDSRELM SILARVACDV VITDFSMPNT GRVDGLPMLS MIRREHVALP VIVLTNMANA GLLRAMLNEG VLGIVEKGAE RNELFAAVRA ALRGAVYISA KLQFELSKLG LTETESRRAA NLTPRELEVL RLLGSGKSPA EVSQILHRTI KTVSWAKISA KRKLGLKSDA ELYEYVANLG LNG
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