Gene Bcenmc03_4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4641 
Symbol 
ID6127458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1648780 
End bp1649421 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID641651733 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001778266 
Protein GI170737006 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.169112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.068024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGCC GCGTTGTACT CGCAGACGAC CATCCGATCA TGCTGCTCGG CTGCCGCATT 
CTGATCGAGC AGGGCGGCCT GGAGGTCGTG GGGGAAGCTC GCGACTCCAG GGAATTGATG
TCGATCCTGG CACGCGTCGC GTGCGATGTC GTGATCACGG ATTTCTCGAT GCCTAACACT
GGACGTGTCG ACGGCTTGCC TATGCTGTCG ATGATTCGAC GAGAGCACGT AGCCTTACCG
GTCATCGTGC TTACGAACAT GGCAAATGCC GGGCTGTTAC GCGCTATGTT GAACGAAGGT
GTCCTGGGTA TCGTCGAGAA AGGAGCGGAA AGGAACGAAC TGTTCGCTGC CGTACGTGCC
GCCCTGAGAG GGGCAGTCTA CATCAGTGCC AAGCTGCAGT TCGAACTGTC GAAGCTCGGG
CTGACCGAAA CGGAAAGCCG GCGTGCCGCT AATTTGACTC CTCGAGAGCT CGAAGTATTG
CGCCTTCTCG GCAGCGGTAA ATCACCGGCC GAAGTCAGCC AGATTCTCCA TCGGACAATT
AAAACGGTCA GTTGGGCCAA GATATCGGCA AAGCGCAAGC TCGGCCTCAA AAGCGATGCC
GAACTCTACG AGTACGTCGC CAATCTCGGT CTCAACGGTT GA
 
Protein sequence
MACRVVLADD HPIMLLGCRI LIEQGGLEVV GEARDSRELM SILARVACDV VITDFSMPNT 
GRVDGLPMLS MIRREHVALP VIVLTNMANA GLLRAMLNEG VLGIVEKGAE RNELFAAVRA
ALRGAVYISA KLQFELSKLG LTETESRRAA NLTPRELEVL RLLGSGKSPA EVSQILHRTI
KTVSWAKISA KRKLGLKSDA ELYEYVANLG LNG