Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4562 |
Symbol | |
ID | 6127384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1550258 |
End bp | 1551778 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651659 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001778192 |
Protein GI | 170736932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.573494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0249229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTT ACCGTCGTGC CGCACTCGTT CTGGCCGCGT GTCTGGGCAC CTTTCTCGCC ACGCTCGACA TCAGCATCGT CAACGTTGCG TTACCGACGC TGCAGACGGC GCTCGATACC GATATCGGCG GCCTGCAGTG GGTCATCAAC GCGTACGCGC TCGCGTTGTC CGCATTCATG CTGTCGGCCG GCCCGCTCGG TGACCGCTAT GGTCACAAGC GCGTGTGGCT CGCCAGCGTG ATCCTGTTCA CGGCCGGGTC GATCGTCTGC GCGTGTGCGG GCCGGATCGA GCCGCTGCTG GCTGGCCGCG CGATCCAGGG GCTCGCCGGC GCGTTGCTGA TTCCCGGCGC GATGCCGATC CTCACCCATG CGTTTCCCGA CGCGCGCGAA CGCGCCCGCG TGATCGGCGG ATGGTCGGCG TTCAGCGCAC TCGCGCTGAT CGTCGGGCCG CTGCTGGGCG GCCTGCTGGT CGAGCATGGC GGATGGCAGG ACATCTTTCT CGTCAACGTA CCGATCGGTA TCGTTGCCGT GCTGCTCGGC ACCTGGGGCA TTCCGGAGCG GCGGCATCCG GAGCATGCGG CGTTCGATCC GTTCGGGCAG GTGCTGAGCG TGGCGTGGCT CGGCCTGCTG ACCTACGGGC TGATCGGCAT CGGCGAAGTC GGTACCTCGC ACGTGAAGGT GCTGGCGCCA CTGGCGGGCG CGGCGGTGGT GTTCGTCGTC TTCGTCCGTG TCGAAACGCG TGTCGCGCGG CCGCTGCTGC CGGTGTGGCT GTTTCGCGAC CGGCGGCTGG TGCGCGCGAA TCTCGCGTCG TTCGTGCTCG GGTTCTCGGG GTACAGCAGC CTGTTCTTCC TGTCGTTGTT CCTGCAGCAG GCGCAGGGCC GTGCGCCCGC CGCAGCCGGG TGGCAACTGA TGCCGCAGTT CGTGATGACG GCGATCACGT CGGTGCTGTT CGGGCGCATC GCGGCGCGTA TCCCGTTGCG CGCGCTGATG GTGGCCGGAT ACGGGCTGAT CGGCGCGATG CTCGTGGTGA TGGCCGGCTT CGGTGCGGCA ACCCCCTATG CGGCGCTCGG CGTGGTGCTG GCGCTGCTCG GCGTCGGCAT GGGGCTCGCG GTGCCGGCGA CCGGCATGAC CGTGATGGAG CTGGCGCCGG CGGAGCGCGC GGGCATGGCG TCGGCGACGA TGAACGCGTT GCGCCAGACC GGGATGAGCC TGGGCATCGC GGTGCTCGGC AGCATGATGA GCGTGGGCGC GTTGCACCGG ATGACGGCGG CGATGCACGC GGCGGGCAGT GCGCAAGCGG ATACGCTCGC GCGGCAGGCA GTGATGGAGC ACATGTTCGT GGCTGGGCGA CCTGACATGC TCGGCGCGTA TCGGGATGCG ATGGCGCACG GGTTTTCGAT CGCGATCCTG TGTTCCGGGA TCCTCAGTAT GGCGGTCGTG GTGATGTTGA TGATGCGGCG TGAAAAGGAG CCGCGAATGG CCGTGTCGTG CGTGACGCCT TCGCAGCCGG AACCGGAATG A
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Protein sequence | MSRYRRAALV LAACLGTFLA TLDISIVNVA LPTLQTALDT DIGGLQWVIN AYALALSAFM LSAGPLGDRY GHKRVWLASV ILFTAGSIVC ACAGRIEPLL AGRAIQGLAG ALLIPGAMPI LTHAFPDARE RARVIGGWSA FSALALIVGP LLGGLLVEHG GWQDIFLVNV PIGIVAVLLG TWGIPERRHP EHAAFDPFGQ VLSVAWLGLL TYGLIGIGEV GTSHVKVLAP LAGAAVVFVV FVRVETRVAR PLLPVWLFRD RRLVRANLAS FVLGFSGYSS LFFLSLFLQQ AQGRAPAAAG WQLMPQFVMT AITSVLFGRI AARIPLRALM VAGYGLIGAM LVVMAGFGAA TPYAALGVVL ALLGVGMGLA VPATGMTVME LAPAERAGMA SATMNALRQT GMSLGIAVLG SMMSVGALHR MTAAMHAAGS AQADTLARQA VMEHMFVAGR PDMLGAYRDA MAHGFSIAIL CSGILSMAVV VMLMMRREKE PRMAVSCVTP SQPEPE
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