Gene Bcenmc03_4535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4535 
Symboltdh 
ID6127357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1519290 
End bp1520318 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID641651632 
ProductL-threonine 3-dehydrogenase 
Protein accessionYP_001778165 
Protein GI170736905 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TGGCAAAGCT CGAACGCGGC CCCGGCCTCA CGCTCACGCG CGTGAAGCGT 
CCCGAAGTCG GCCACAACGA CGTGCTGATC AAGATCCGCC GCACGGCGAT CTGCGGCACC
GACATCCATA TCTGGAAGTG GGACGACTGG GCGCAGAAGA CGATTCCGGT GCCGATGCAC
GTCGGCCACG AATACGTCGG CGAGATCGTC GAGATGGGGC AGGAAGTGCG CGGCTTCGCG
ATCGGCGACC GCGTGTCCGG CGAAGGTCAC ATCACGTGCG GTTTCTGCCG AAACTGTCGC
GCCGGGCGCC GGCATCTGTG CCGCAACACG GTGGGCGTCG GCGTGAACCG CGAAGGCGCG
TTCGCCGAAT ACCTGGCGAT TCCGGCGTTC AACGCGTTCA AGATTCCGCC GGAGATCTCC
GACGATCTCG CGTCGATCTT CGATCCGTTC GGCAACGCGA CACATACGGC GCTGTCGTTC
AACCTCGTCG GCGAAGACGT GCTGATCACC GGCGCGGGCC CGATCGGCAT CATGGCCGTC
GCGATCGCGA AGCACGTCGG CGCGCGCAAC GTCGTCATCA CCGACATCAA CGACTATCGG
CTGGAACTCG CACGCAAGAT GGGCGCGACG CGCGCGGTCA ACGTCGCGCG CGAGTCGCTG
CGCGACGTGA TGGCCGACCT GCACATGACC GAAGGCTTCG ACGTCGGGCT CGAGATGTCG
GGTGTGCCGA GCGCGTTCAC GAGCCTGCTC GAGGCGATGA ACCACGGCGG CAAGGTCGCG
CTGCTCGGCA TTCCGCCCGC GCAGACGGCG ATCGACTGGA ACCAGGTGAT CTTCAAGGGG
CTCGAGATCA AGGGCATCTA CGGCCGCGAG ATGTTCGAGA CCTGGTACAA GATGGTCGCG
ATGCTGCAGA GCGGCCTCGA CCTGTCGCCG ATCATCACGC ATCGCTTCGC GGCCGATGAT
TACGAGCAAG GCTTCGCCGC GATGCTGTCC GGCGAAAGCG GCAAGGTGAT TCTCGACTGG
ACGGCCTGA
 
Protein sequence
MKALAKLERG PGLTLTRVKR PEVGHNDVLI KIRRTAICGT DIHIWKWDDW AQKTIPVPMH 
VGHEYVGEIV EMGQEVRGFA IGDRVSGEGH ITCGFCRNCR AGRRHLCRNT VGVGVNREGA
FAEYLAIPAF NAFKIPPEIS DDLASIFDPF GNATHTALSF NLVGEDVLIT GAGPIGIMAV
AIAKHVGARN VVITDINDYR LELARKMGAT RAVNVARESL RDVMADLHMT EGFDVGLEMS
GVPSAFTSLL EAMNHGGKVA LLGIPPAQTA IDWNQVIFKG LEIKGIYGRE MFETWYKMVA
MLQSGLDLSP IITHRFAADD YEQGFAAMLS GESGKVILDW TA