| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4334 |
|---|
| Symbol | |
|---|
| ID | 6127161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1299891 |
|---|
| End bp | 1300796 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641651436 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001777969 |
|---|
| Protein GI | 170736709 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.106421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.740204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTT CGAAGATTGA TCTGAACCTG TTCGTCGTAT TCGAGGCGAT CTACAACAAG
CGCAACCTGA CGCGCGCGGC CGAGGTGCTG AACCTCACGC AGCCGGCCGT CAGCAACGCG
CTGGCGCGGC TGCGCAAGAC GCTGAACGAT CCGCTGTTCG TCAGCACGCC GGCCGGGATG
ATGCCGACGC CGATGGCCGA GAACATCGTC GGCCGCGTGC GCGAGGCGCT GCAACTGCTC
GATTCGAGCG CGCACGAAGG CGACGTGTTC GATCCGGCTT CGTCGGCGCG CGTGTTCCGG
CTCAGCATGA GTGACCTGAC CGAGGCGCTG TTGCTGCCCG CGCTCGGCGA ATTGCTGCAG
ACGCATGCAC CCGGCATGCA CGTGCGCAGC TACACGATGG ACCGCCGCGA AGTCGCGACC
GCGCTCGCGA ACGGCTCGGT CGACATCGCG ATCGACGCGC CGCTGATCGG CGATCCGCAT
CTGCACCAGG CACTGCTCGT GCAGGACCGC TACGCGTGCA TGATCCGCGA CGATCACCCG
TTCAAGGGCG ACACGCTGAC CATGGACGAC TACCTGTCGA TGGGCCACAT CCACGTATCG
AGCCGCCGCA AGGGCAGCGG GCACGTCGAC GCGGAACTGA CGCGGCTCGG GCTGCGCCGC
AACATCCAGA TGCGCGTGCA GCACTACATG GTCGCGCCGC TGATCGCGAT GCGCAGCGAT
CTCGTGCTGA CGGCGCCGCT GCGGCTGCTG CAGCGCTATC CGGCGCGGAT TCTCGAACTG
CCGTTCGAGA TGCCGGGGCT CGACTACTTC TGCTACTGGC ATCGCAGCGC CGATCAGGAT
CAGGGCAGCC AGTGGCTGCG CGAGCAGTTG ATGGCGTTGA TGGGCGGGAT GGGGGCGGTG
TGGTGA
|
|---|
| Protein sequence | MRLSKIDLNL FVVFEAIYNK RNLTRAAEVL NLTQPAVSNA LARLRKTLND PLFVSTPAGM
MPTPMAENIV GRVREALQLL DSSAHEGDVF DPASSARVFR LSMSDLTEAL LLPALGELLQ
THAPGMHVRS YTMDRREVAT ALANGSVDIA IDAPLIGDPH LHQALLVQDR YACMIRDDHP
FKGDTLTMDD YLSMGHIHVS SRRKGSGHVD AELTRLGLRR NIQMRVQHYM VAPLIAMRSD
LVLTAPLRLL QRYPARILEL PFEMPGLDYF CYWHRSADQD QGSQWLREQL MALMGGMGAV
W
|
|---|
| |