Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4299 |
Symbol | |
ID | 6127127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1256387 |
End bp | 1257100 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651402 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001777935 |
Protein GI | 170736675 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.190696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTGA CAATACTGCA CGACTGTTTC GACGCACTAC AACGCGCGCC CACCGCGGAA GCCGCGTTTC CGCCGATTGC CGCCGCCGCG GCCGCGCTCG GGTTCCGGTA TTGCGTGTAC GGCTTGCGCC GCACGCTGCC GCTCGCCCGG CCCGACCTGC AGATCGTCGG CAATCATCCA CGCGAATGGG AACACCGTTA TGTGAAATTC GGCTACGTGA CGATCGATCC GATCATCAAG CGGGTCGCGA GCCAGCCGCG GCCGGTCGTA TGGAATGCGT TCGACGAACC GGGCGACACC GCGTTCTGGC ACGACGCGGC GTGCTTCGGG ATGCGTTACG GCTGGTCGCA CGGCGGCTAC GACCGGGCCG GCAATCTCGG CGTGCTGACG CTCGTGCGCG ACACGACGCC GCTCGACGCG GACGAAATCT CGCGATTGCG CGCACCCTGC GCGAGCCTCG CGCATGCGGC GCACGCATAC CTGATGCCGC GCCTCGCCGA TCCGATCGCG CCGGTCGGCA CCGGGCTGAC GCTGCGCGAG CGCGAGGTCC TGGCGTGGAC GGCCGACGGC AAGACGGCCT ACGAGATCGG GATGATCTTC GGGATCGCGG AGCGAACGGT GAAGTTCCAC CTGCAGAACG CCGTCGTGAA GCTCGACGCG ATGAACAAGA CGCATGCGGC CACCAAGGCC GCGATGCTCG GGCTGCTGCC CTGA
|
Protein sequence | MDLTILHDCF DALQRAPTAE AAFPPIAAAA AALGFRYCVY GLRRTLPLAR PDLQIVGNHP REWEHRYVKF GYVTIDPIIK RVASQPRPVV WNAFDEPGDT AFWHDAACFG MRYGWSHGGY DRAGNLGVLT LVRDTTPLDA DEISRLRAPC ASLAHAAHAY LMPRLADPIA PVGTGLTLRE REVLAWTADG KTAYEIGMIF GIAERTVKFH LQNAVVKLDA MNKTHAATKA AMLGLLP
|
| |