| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4223 |
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| Symbol | |
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| ID | 6127054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1159654 |
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| End bp | 1164495 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641651329 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001777862 |
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| Protein GI | 170736602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.551449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CGTATCGCAA CATCTGGAAC GCGGCGACGG GCACATGGAC GGCCGTGGCC
GAAACGGCGC GCTCGCGCTC GAAGGGGTCG GCGCGCGCGG CGCGCCAGGC CGTGGCGGTG
CTCGCGCTGG GCAGCGCATC GATCGGCGGC GCGTTCGCGG CCGATGCATG CACGACCGAG
GACGGCGCAA GCGGGTCGGT CGACGCGGCC GGCGTGTGCA AAGTAGCGAG CAAGATCGGC
ACGAGTGCGA TTGGCACAAC GGCCGCACTC GACGACACGT ACGTGAAAGT TCGGTCCGGG
ACTTACGCGC TCCCCAACGC CGCCCTGGCG GCCGATAGCG CGACCGCTAT CGGCGCGAAT
GCCAGCGCCG CAGGACAGTC GTCCGTCGCG ATCGGCGGCA ATACCATGGC AACCGTGAAC
GGCGTGGCGA TTGGCACACT TTCGCAAGCA ACCGGAGCGA ATTCGACGGC AGTCGGCGTA
GGCGCCGCGG CTACCGCGTC CGCGGCTTCG GCACTGGGAC GCGGCGCGGC AGCTAGCGGA
ACAAACACGT CGGCATTTGG CAACGGCGCT CGGGCTAGCG GCGATAGCGC ATCGGCATTG
GGCCGTGGCG CCGTGGCAAG CGAAGCCAAT TCGGTTGCGC TTGGTGCCAA TTCCACCGCT
GATCGCGCGA ATGCCGTCTC GGTTGGCACT ACGAGCGCTC AGCGGCAGAT CATCAATGTC
GCCGACGGTA CGGCCGGTAC GGATGCGGTC AACCTGAATC AGTTGAACGC CGCGATCGCG
GCGAGCGATC AGTATTTCAT GGTCAACAGC ACGAGCGCGA ATCTCGCGAA TGCGACGGGC
GCCAATGCTG TTGCGATCGG GCAAGCCGTG ACGTCCAGCG GCTCCAGCTC GGTTGCGATC
GGTTCGGGTA CCTCAGCAGA CGGGCTTCAT TCGATGGCAC TCGGTGCGTC GTCGCGCGTC
GTGGGCGACA GCAACCTGGC AGTGGGCGAT GGTGCAACGG TAACGAGTTT GACCACTGCG
CCGACGAACG CCATTGCAAT CGGCAAGGGC GCCAACGTAT CCGACGCCGG GGTAGCCGGA
GCGACCGGCT CGATCGCAAT CGGCACTAAC GCGGCTGCCG GCGGCACGGG CACGATCATG
ATCGGGACGA GCACGCGCCA TGCGGGCTCC GGCGCCACGG TCCTGGGCAC CAATGCGAGC
GCGATGGGCG GTGGCGCGGG TGTTGCGATG GGGATCAACA GCGCCGCCGC GGGCAATGCT
TCGGTTGCGA TGGGCCCGAA CGCCACAGCC GCTGGCGCTG GCTCGATCGT AATCGGCAAT
CAGGCTGCAA CCACGGCCGC TAACAGCGTG GCACTCGGCA ATGCAGCCAC AGGCAGCGCC
GTCAACACCA CCGCGATCGG CAGCAATGCC AAGGCAACCG GGAACAACTC GACCGTGCTC
GGCCAAAGCT CGTCCGCGAG CGGCCTGTCG GCGGTCGGCA TCGGCTTCCG GGCCAATGCA
TCCGGGCAGG AGGCCATTTC GCTCGGTTCG GACTCAGTAG CGACCGGACC GCAAAGCACC
GCCATTGGTA CGTCGGCAAC CGCAAACAGC ACGGGTTCGG TTGCGCTCGG CAACGGAGCC
ACGAGCAGCG GCGCCAATGC CACCGCAATC GGCCGTCTTG CTACTGCCGG CGCCGCCAAC
GCCACGGTAT TGGGCGGAAG CGCGACTGCA ACGGGTCAAA GCGCAATCGC GATCGGCCAA
AGCGCGCATG CAAACGGTCT GTCGGCAATC GGCATCGGCT TCCTCAGCGA CGCGCAAGCC
GACAACTCGG TCGCACTCGG CGCCCGCTCC GTCGCGAATC GCGACAACAC CGTTTCCGTC
GGTTCGGCCA GCCAGCAGCG TCAGATCGTC AACGTCGCAG CCGGCACGCA AGGTTCCGAC
GCGGTGAACG TCAGCCAGCT CGCGCCGGTC GTGACCGCTC TCGGCGGCGG CGCAACCATC
GATTCGGCGA CGGGCGCCGT GACCGGCCCC ACGTACACGC TCACCAACGG CGGCGCACAA
ACGACGGTCG GTGGCGCACT CGGCGCACTC GACAGCGCGC TCACGACTGC CAACGGCAAC
ATCGCACGCA ACACGGGCGA CATCACGACG ATCAACACCA AGCTCGACGG CCTGTCGAAC
GGCACGGTTG GCCTCGTCCA GCAATCGGCT GCCGGTGCTG ACATCACCGT CGGCGCGAAC
ACCGATGGCG CAGCCGTCGA CTTCACCGGC ACGACCGGCG CACGCAAGCT GACCGGCGTC
GACGCAGGTG CGGTCTCGGC GTCGAGCAGG GATGCGGTGA ACGGCTCGCA GCTGCACGGC
GTGTCGAGCA GCGTCGCATC GGCCATCGGC GGCGGTTCCG TCGTCAATGC CGACGGTTCG
ATCTCCGCAC CGAGCTTCAC GGTCGGCGAC GGCAGCGGCG GCACCACCAC GGTTCGCTCG
GTCGGCGGCG CAGTCGCCAA CCTCGACGGT CGTGTGACGA CGAACGAAGG CGACATCGCA
TCGCTGGCCG ACCAGATCGG CAGCGGCACG CTCGGCCTCG TCCAGCAATC GGCTGCGGGC
GCTGACATCA CCGTCGGCGC GAACACCGAC GGCGCAGCCG TCGACTTCAC CGGCACGGCC
GGCGCACGCA AGCTGACCGG CGTCGATGCT GGCACGGTTT CGGCATCGAG CAAGGATGCG
GTGAACGGCT CGCAACTGCA CGGCGTGTCG AGCAGCGTCG CATCGGCCAT CGGCGGTGGT
TCCGTCGTCA ACACCGACGG TTCGATCTCG GCACCGAGCT TCACGGTCGG TGACGGCAGC
GGCGGCACCA CCACGGTTCG CTCGGTCGGC GCCGCGGTCG CCAACCTCGA CGGTCGTGTG
ACGACGAACG AAGGCGACAT CGCATCGCTG GCCGACCAGA TCGGCAGCGG CACGGTCGGG
CTCGTCCAGC AATCGGCTGC CGGCGCAGAC ATCACGGTCG GCGCGAATAC CGACGGCGCA
GCCGTCGACT TCACCGGCAC GGCCGGCGCA CGCAAGCTGA CCGGCGTCGA TGCAGGCGCG
GTCTCGGCGA CGAGCACCGA CGCGGTGAAC GGCTCGCAAC TGCACGGCGT GTCGAGCAGC
GTCGCATCGG CCATCGGCGG TGGCTCGATC GTCAACGCCG ACGGCTCGAT CTCCGCACCG
AGCTTCACGG TCGGTGACGG CAGCGGCGGC ACCACCACGG TTCGCTCGGT CGGCGGCGCA
GTCGCCAACC TCGACGGTCG TGTGACGACG AACGAAGGCG AGATCGCATC GCTGGCCGAC
CAGATCGGCA GCGGCACGGT CGGCCTGGTT CAGCAATCGG CTGCGGGCGC TGACATCACC
GTCGGCGCGA ACACCGACGG CGCAGCGGTG AACTTCACCG GCACGACCGG CGCTCGCAAG
CTGACCGGCG TCGACGCAGG CGCGGTTTCC GCATCGAGCA CCGACGCGGT GAACGGCTCG
CAACTGCACG GCGTGGCGGA CAGCGTGGCA TCGGCCATCG GCGGCGGCTC GGTCGTGAAC
GCCGACGGTT CGATCTCGGC GCCGAGCTTC ACGGTCGGCG ACGGCAGCGG CGGTTCGACC
ACGGTCCATT CGATCGGCGA CGTCGTGACC AACATCGACG GTCGCGTGAC GACGAACGAA
GGCGCGGTGG CGTCGCTGGC CGATCAGATC GGCAGCGGCA CGCTCGGCCT GGTTCAGCAA
GCTGCCCCGG GCGCCAACCT GACGGTCGGC GCGAACACCG ACGGCGCTGC GGTGAGCTTC
GTCGGCACGG CTGGCGCACG CAAGCTGTCG GGCGTCGCGA ACGGCGTGAA CGACGACGAT
GCAGTGACGA TCGCCCAGTT GAAGGCGACG GGCCTCATCG ACTACACGGG CAAGGAAATC
GCGGCCGTGA CGTATGACGA CATCTCGCTT GCCAGCGTGA CCTTCGGCGG TTCGGATGGC
ACCAAGCTGC TCAACGTCGG GCCGGGCCTG ATCGCGGCGG GCAGCATGGA AGCCGTGAAT
GGTGGTCAGT TGCACGACCT CCAGGATCAG TTCGCGCGGA AATACGCCGA ACTCGACGGC
CGGGTCGGCG AACTCGAAAC CGGTGGCGGT TCGGGTGGCG GCGGTGGTGG TGACGGTGGC
GGCAGCGTCG GCCCCGGCAC CGGCGGCGAT GGCTCGCTCG TCGTCGGCGA CGGCTCCGCA
GCCTCGGGCG AGAACAGCTC GGCGATCGGC CAGGGTTCGG CCGCATCGGG TGACGGCAGC
ACGGCGGTCG GCCAGGGTTC GAACGCATCG GGCGGCAACA GCTCGGCGAT CGGCCAGGGT
TCGAACGCAT CGGGCAGCAA CAGCTCGGCG ATCGGCCAGG GCGCGGTGGC CTCGGGCGAC
AGCAGCACCG CAATCGGCCA GGGTTCGAGC GCGACCGGCA GCGGTTCGGT GGCGATCGGC
GCGGGCTCGG TGGCAACCGA GGCGAACACC GTGTCGTTCG GTGACGGCAC CGCCGAAGGC
AATCGCCGGC TCGTGAACAT CGCGGACGGC GTCAACGCCA GCGACGCGGC GACGAAGGGC
CAGCTCGATC GTGCGATCAA CGGCATGCAA GGCCAGATCA ACGACGTCGC GAAGAACGCG
TACGCCGGTG TCGCGGCAGC GATGGCGATG CCGAACCTGA CGCCGTCGCA GCCGGGCAAG
ACCGTCGTCG CAGCCGGCGC CGCGAACTAC AAGAGCGGCT CGGCGATCGC AGCCGGCGCG
ACCTACCGGA CGCGCGACGG CAAGTGGCTG ATGAACGGCG CCGTGTCCGT CACGTCGACG
GGCGATGCAG GTGTGCGTGC ACAGGTCGGC TACGAGTTCT GA
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| Protein sequence | MNKTYRNIWN AATGTWTAVA ETARSRSKGS ARAARQAVAV LALGSASIGG AFAADACTTE
DGASGSVDAA GVCKVASKIG TSAIGTTAAL DDTYVKVRSG TYALPNAALA ADSATAIGAN
ASAAGQSSVA IGGNTMATVN GVAIGTLSQA TGANSTAVGV GAAATASAAS ALGRGAAASG
TNTSAFGNGA RASGDSASAL GRGAVASEAN SVALGANSTA DRANAVSVGT TSAQRQIINV
ADGTAGTDAV NLNQLNAAIA ASDQYFMVNS TSANLANATG ANAVAIGQAV TSSGSSSVAI
GSGTSADGLH SMALGASSRV VGDSNLAVGD GATVTSLTTA PTNAIAIGKG ANVSDAGVAG
ATGSIAIGTN AAAGGTGTIM IGTSTRHAGS GATVLGTNAS AMGGGAGVAM GINSAAAGNA
SVAMGPNATA AGAGSIVIGN QAATTAANSV ALGNAATGSA VNTTAIGSNA KATGNNSTVL
GQSSSASGLS AVGIGFRANA SGQEAISLGS DSVATGPQST AIGTSATANS TGSVALGNGA
TSSGANATAI GRLATAGAAN ATVLGGSATA TGQSAIAIGQ SAHANGLSAI GIGFLSDAQA
DNSVALGARS VANRDNTVSV GSASQQRQIV NVAAGTQGSD AVNVSQLAPV VTALGGGATI
DSATGAVTGP TYTLTNGGAQ TTVGGALGAL DSALTTANGN IARNTGDITT INTKLDGLSN
GTVGLVQQSA AGADITVGAN TDGAAVDFTG TTGARKLTGV DAGAVSASSR DAVNGSQLHG
VSSSVASAIG GGSVVNADGS ISAPSFTVGD GSGGTTTVRS VGGAVANLDG RVTTNEGDIA
SLADQIGSGT LGLVQQSAAG ADITVGANTD GAAVDFTGTA GARKLTGVDA GTVSASSKDA
VNGSQLHGVS SSVASAIGGG SVVNTDGSIS APSFTVGDGS GGTTTVRSVG AAVANLDGRV
TTNEGDIASL ADQIGSGTVG LVQQSAAGAD ITVGANTDGA AVDFTGTAGA RKLTGVDAGA
VSATSTDAVN GSQLHGVSSS VASAIGGGSI VNADGSISAP SFTVGDGSGG TTTVRSVGGA
VANLDGRVTT NEGEIASLAD QIGSGTVGLV QQSAAGADIT VGANTDGAAV NFTGTTGARK
LTGVDAGAVS ASSTDAVNGS QLHGVADSVA SAIGGGSVVN ADGSISAPSF TVGDGSGGST
TVHSIGDVVT NIDGRVTTNE GAVASLADQI GSGTLGLVQQ AAPGANLTVG ANTDGAAVSF
VGTAGARKLS GVANGVNDDD AVTIAQLKAT GLIDYTGKEI AAVTYDDISL ASVTFGGSDG
TKLLNVGPGL IAAGSMEAVN GGQLHDLQDQ FARKYAELDG RVGELETGGG SGGGGGGDGG
GSVGPGTGGD GSLVVGDGSA ASGENSSAIG QGSAASGDGS TAVGQGSNAS GGNSSAIGQG
SNASGSNSSA IGQGAVASGD SSTAIGQGSS ATGSGSVAIG AGSVATEANT VSFGDGTAEG
NRRLVNIADG VNASDAATKG QLDRAINGMQ GQINDVAKNA YAGVAAAMAM PNLTPSQPGK
TVVAAGAANY KSGSAIAAGA TYRTRDGKWL MNGAVSVTST GDAGVRAQVG YEF
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