| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4192 |
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| Symbol | |
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| ID | 6127025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1127230 |
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| End bp | 1128942 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641651300 |
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| Product | TRAG family protein |
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| Protein accession | YP_001777833 |
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| Protein GI | 170736573 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGA TTGCACCCGC GAAGTCTCAA CCGACGCTTG TGGTGGGCCG TTGGCGTGGC
CGCTACCTGC GCTTTGCCGG TCAGCAATTC GTGCTACTTG CCGCGCCTGC TCGTTCAGGA
AAAGGCGTGG GGATTGTGAT CCCGAATCTG CTGAGCTATT CCGACTCCGT GGTCGTGCTC
GATATCAAAC AGGAAAATTT TCGCCTCACG GCAGGCTTTC GGCGCGCGCA CGGACAAGCC
GTGTACCTGT TCAATCCGTT TGCAGAAGAT GGTTGCACGC ACCGCTACAA CCCGTTGTCG
GTCATTGCAG ACGACATGTT TCGCGTCGGC GACATTCTGG CGATCGGTTA TGTGTTGTAT
CCGGCCGGCG GGCATGACGA ATTCTGGAAA GACCAGGCAC GCAACCTTCT GTTGGGACTG
GTCCTGCTGC TGTGCGATTT GCGTGAGGCG CGTCGTGCTG GCGCGAGCGG GGTGCCCGAC
TACCCGATCA CAATGGGCGA GGTATTGCGG CAATCGTCGG GAAATGGTCA GCCGGTCAAA
ACCTACTTGA ACCGGATGCT TATACAGCAT CGACAGTACT TGAGCCGCGC CTGTATTGAT
GCACTGAATC GATTCCTCGC GAATGACGAC AAGGTCCTGG CGAGCATTCT GGCCACTTTT
AATGCGTCAC TGACGATCTG GGCCAACCCG ATTGTTGACG CGGCGACGAG CGCGAACGAC
TTTGATCTGC GAGACGTCAG ACGCCGCAAG ATGTCCGTAT ATCTTGGCGT GACGCCCGAT
CACTTAAGTG AGGCGGCGAT ACTGATGAAT CTGATGTTCT CGCAGCTCGT GAATCTGAAC
ACGAAGGAGT TGGCAGAGGA CAATCCGGCA TTGAAGTATC AATGCCTGCT GCTGCTCGAC
GAGATGACGG CAATCGGAAA AATCCAGATT ATCGCGCGTG CGGTGGCTTA TATGGCGGGC
TACAACCTGC GCCTACTCTC GATCGTGCAA TCCGACTCGC AGCTCGAGTC TGTGTATGGC
CGAGCTGACG CGAGGACCAT TGTCACGAAT CATGCGATGC AGATTCTTTT CGCCCCGCGC
GAACAGAAGG ACGCCAATGC CTACTCCGAG ATGCTCGGCA CGCGCACGGA GCGATCGCGC
AGCACCAGCC GATCGAATGG CATGTTCGGT GCGCGCGGCG GTGCGAGCGA GAGCTTTTCC
GATCAACGTC GTGCGCTGAT GTTGCCGCAG GAGATCAAGG AGCTCGCGCG CGACAAGGAA
ATCATTCTTC TCGAAAATAC CAAGCCGATT TTGGCAGACC GGATCTGCTA TTGGCGCGAT
CGTGCATTTA CTTCACGGGT AATGGACGCG CCAGCGGTGC CTGCACTCGA TCTCGTGGGA
TTTGGTGCAC AAATCGAGCA GCGGCTGCGC GAACTGAGCG ATGACGACGT CGATGAACAG
ACGGGCGAGC TGACGCATGT GCGAGCGGAC TATCTGGAAC TTGTACACGC CTGGGATCCG
CGCGAGCTGC CGCAGGCGCT GGACAATGTC AGTTGCGAGG AGGCAGCCGC GTATGTGGAT
CGGCATTTCA CGCTGCTGGG CGTGCCGGCC GAGGACGTAG CGCGCGCCGG ACGTCGGTTG
GCGCGCGGCG AAGATGGCAT GACTGATACT GAGACGGGCG CGCGCAAGCG TGACCCGAGC
CCCGTCGCCC GGGCAAGTGG TGGTGTTCAA TGA
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| Protein sequence | MRQIAPAKSQ PTLVVGRWRG RYLRFAGQQF VLLAAPARSG KGVGIVIPNL LSYSDSVVVL
DIKQENFRLT AGFRRAHGQA VYLFNPFAED GCTHRYNPLS VIADDMFRVG DILAIGYVLY
PAGGHDEFWK DQARNLLLGL VLLLCDLREA RRAGASGVPD YPITMGEVLR QSSGNGQPVK
TYLNRMLIQH RQYLSRACID ALNRFLANDD KVLASILATF NASLTIWANP IVDAATSAND
FDLRDVRRRK MSVYLGVTPD HLSEAAILMN LMFSQLVNLN TKELAEDNPA LKYQCLLLLD
EMTAIGKIQI IARAVAYMAG YNLRLLSIVQ SDSQLESVYG RADARTIVTN HAMQILFAPR
EQKDANAYSE MLGTRTERSR STSRSNGMFG ARGGASESFS DQRRALMLPQ EIKELARDKE
IILLENTKPI LADRICYWRD RAFTSRVMDA PAVPALDLVG FGAQIEQRLR ELSDDDVDEQ
TGELTHVRAD YLELVHAWDP RELPQALDNV SCEEAAAYVD RHFTLLGVPA EDVARAGRRL
ARGEDGMTDT ETGARKRDPS PVARASGGVQ
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