Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4089 |
Symbol | |
ID | 6126922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1028057 |
End bp | 1028986 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641651197 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001777730 |
Protein GI | 170736470 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00576111 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGGT TTCTGAGCAT CGAGGCATTC GTGAGGGTCG CGGAGGCCAG CAGCTTCGCC GAAGCGGCGC GGCAACTGGG TGTGACGAGT TCGGTCGTGA CGAACCGCAT CCAGCAGCTC GAGAAGTTCG TCAATGCACC GTTGTTCCAC CGCAGCACGC GCCACGTGCG GCTGTCGGAA GTCGGCGAGA CGTTCTATCG CGAGTGCGCC GAGGTGGTGG GCCGCGTCAA CGAGCTGACG GACCAGATGC GCGAACTGCG CGCCACGCCG ACCGGCCGGC TGCGCATCCA GATGCTGCCC GGCTTCGCAC TCGATCACTT CGGCGCGCCG CTCGCCGCAT TCAATCAGCG CTATCCGGGC ATCCAGCTCG ACATCATCGT CAACGATCGC GTCGTCGACC CTGTCGAAGA AGGGTTCGAC ATCGCGTTCC AGATCTTCCC GCCGATTTCC GAGTCGCTGA TCGAGCGACG GCTGTTCACG GTCAGGCGTC TCTTCTGTGC CGCGCCAGCG TATGTCGACG CGCATGGTGC ACCACAACAT CCGCGCGATC TGCTGCAACA CACCACGGCG TTGTATTCGG GCTACCCGTC GCGCAACCGC TGGACGATGA CGCGCGGCGA CGAGGTCGTC GAAATGGAGT TGCCGGGCAT GATCCGCTCG AACTCCGTTC ATCTGTTGCG CGAGTACGCG TTGACCGGCG GTGGCGTCGT CTGCCTGCCG ACGCTCGTGG CGAGCGACGC GCTCGTCGCG GGCCGCCTGG TGCCGATCCT GACCGACTAC CAGCTCGCGC CGCTGAGCTT CGCCGCCGTT TATCCCGCGA CGCAGCGACA GGCGTTGAAG GTGAGAGCGT TGGTCGAATT CCTCGCCGAA TACATCGGCG ACGAATCGCC GTGGGATCTG CCGCTGCTGG CGCGCGGCTG GGTACGCTGA
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Protein sequence | MDRFLSIEAF VRVAEASSFA EAARQLGVTS SVVTNRIQQL EKFVNAPLFH RSTRHVRLSE VGETFYRECA EVVGRVNELT DQMRELRATP TGRLRIQMLP GFALDHFGAP LAAFNQRYPG IQLDIIVNDR VVDPVEEGFD IAFQIFPPIS ESLIERRLFT VRRLFCAAPA YVDAHGAPQH PRDLLQHTTA LYSGYPSRNR WTMTRGDEVV EMELPGMIRS NSVHLLREYA LTGGGVVCLP TLVASDALVA GRLVPILTDY QLAPLSFAAV YPATQRQALK VRALVEFLAE YIGDESPWDL PLLARGWVR
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