Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3900 |
Symbol | |
ID | 6126733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 826842 |
End bp | 827759 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651008 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001777541 |
Protein GI | 170736281 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.447965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATCGG TCGATCATCT CGATCTGAAC CTGTTGCGCG TATTCCAGGC GATCGTCGAG GAACGCAGTC TGACGAAGGC CGGCGAGCGG CTCGCGCTGT CGCAGCCGGC CGTCAGCTAT TCGCTCGGCC GGCTGCGCAC GCTGTTCGAC GATCCGCTGT TCGTGCGGAC GCGCTCGGGC ATGCAGCCGA CGCCGGTCGC GCTCGAACTC GCGGGCATCG TCGGCAAGGC GCTCGACATG GTGCGCGTGG CGCTGCGCTA TGCGGAGCGT TTCGATCCGG CCACCAGCAC GCGCACGTTC CGGCTGTCGC TGTCGGATGC GGGCGAGATG GCGTACCTGC CGGCGATCTG CCAGGCGCTG CGCGAGCGTG CGCCGCGCGT GACGTTGAGC GTGCAGCCGC TGCCGGTGGA GGAGATCGAG GAAGCGCTGC GCGCGAGCCG GCTCGATTTC GCGATCGGCA ACCTGCCCGA GCTGATGCCG CGCACGCGCC ACCAGGTGCT GTTCGAGGAA ACCTACGTGT GCATGACGGG GCGCCGGCGC GGGCTGCCGA CGGCGGCCGC GCTGAGCCTC GAGCAGTTCG TGCGCGCCGC GCACGTCAAC GTGAAATCGG TCGAGCACAG CCACCACGCG CTCGACGACG CGTTGCGCGC GCAGGGCGTG GGCCGCAACA TCGCGCTCGA GGTGCCGCAC TTCGTCGCGC TGCCGAGCGT GCTGTCGGTC ACCGATCTGT ATGCGACGCT GCCGAGGCGG CTCGCGCAGA TCCTTAACCG CGACAACGCA TTCCGCCTGT ATGAACTGCC GGTCACGCTG CCGCCCGCGC CGGTGACGAT GCACTGGCAC GAGCACTTTC ACGAGGACGA AGGCAACGCG TGGATGCGCG CGCTGCTCGC GGAGATCGTC GAGCGTTTCG ACGAATGA
|
Protein sequence | MTSVDHLDLN LLRVFQAIVE ERSLTKAGER LALSQPAVSY SLGRLRTLFD DPLFVRTRSG MQPTPVALEL AGIVGKALDM VRVALRYAER FDPATSTRTF RLSLSDAGEM AYLPAICQAL RERAPRVTLS VQPLPVEEIE EALRASRLDF AIGNLPELMP RTRHQVLFEE TYVCMTGRRR GLPTAAALSL EQFVRAAHVN VKSVEHSHHA LDDALRAQGV GRNIALEVPH FVALPSVLSV TDLYATLPRR LAQILNRDNA FRLYELPVTL PPAPVTMHWH EHFHEDEGNA WMRALLAEIV ERFDE
|
| |