| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3648 |
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| Symbol | |
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| ID | 6126482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 549443 |
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| End bp | 551347 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641650756 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001777290 |
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| Protein GI | 170736030 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGACT TGCTGAAAAC CATCGACGAC CCGGCGGATT TGCGCCGCCT CGATCGTCGC
CAACTGCAAC CGCTCGCGGA TGAACTGCGC GCGTTCGTGC TCGACAGCGT GTCGAAGACG
GGCGGCCATT TGTCGTCCAA CCTCGGGACG GTCGAGCTGA CGATCGCGTT GCACTACGTG
TTCAACACGC CGAACGATCG CATCGTCTGG GACGTGGGTC ACCAGACCTA CCCCCACAAG
ATCCTGACGG GCCGCCGCGA CCAGATGCAT TCGCTGCGTC AGTACGACGG CATCTCGGGC
TTCCCGCGCC GCAGCGAGTC GGAATACGAC ACGTTCGGCA CCGCGCACTC GAGCACGTCG
ATCTCGGCGG CGCTCGGCAT GGCGATCGGC AGCCAGCTGA ACGGCGACGA CCGCTTCTCG
ATCGCGGTGA TCGGCGACGG CGCGATGACG GCCGGCATGG CGTTCGAGGC GATGAACAAC
GCGGGCGTGT CGGAAGATGC GAAGCTGCTC GTGATCCTCA ACGACAACGA CATGTCGATC
TCGCCGCCGG TCGGCGCGCT GAATCGCCAT CTCGCCCGCC TGATGTCGGG CCGCTTCTAT
GCGGCTGCGC GCGCGGGCGT CGAGCGCGTG CTGAGCGTGG CGCCGCCGGT GCTCGAACTC
GCGCGCAAGC TCGAGGAGCA TGCGAAGGGC ATGGTCGTGC CGGCCACGCT GTTCGAGGAG
TTCGGCTTCA ACTACATCGG CCCGATCGAT GGTCACGATC TCGATTCGCT GATCCCGACG
CTGCAGAACA TCCGCGAACT GCGCGGCCCG CAGTTCCTGC ACGTGGTGAC GAAGAAAGGC
CAGGGCTACA AGCTCGCCGA AGCCGATCCG GTGCTCTATC ACGGCCCCGG CAAGTTCAAC
CCGGCCGAAG GCATCAAGCC GTCGACGACG CCCGCGAAGA AGACTTACAC GCAGGTGTTC
GGCGAGTGGC TGTGCGACGA AGCCGAGCGC GATACGCGCG TGGTCGGCAT CACGCCCGCG
ATGCGCGAAG GTTCGGGCAT GGTCGAGTTC GAGAAGCGCT TCAAGGATCG CTACTACGAC
GTGGGCATCG CCGAGCAGCA CGCGGTGACG TTCGCGGGCG GTCTCGCGAC CGAGGGGCTG
AAGCCCGTCG TCGCGATCTA CTCGACGTTC CTGCAACGTG CGTACGACCA GTTGATCCAC
GACGTCGCGC TGCAGAACCT GCCGGTCGTG TTCGCGATCG ATCGCGCGGG CCTCGTCGGC
GCGGACGGCG CGACGCATGC GGGCGCATAC GATCTCGCGT TCATGCGCTG CATCCCGAAC
ATGACGATCA TGGCCGCGTC CGACGAGAAC GAATGCCGCC AGATGCTGCA CACGGCGCTG
CAGCAGCCGA ACCCGACTGC GGTGCGTTAT CCGCGCGGCG CGGGCACGGG CGTGGCGACG
GTGAAGGAAT TCACCGAGAT CCCGCTCGGC AAGGGTGAAG TGCGTCGCCG CACGTCGCAG
CCGGAAGGCA AGCGCGTCGC GATCCTCGCG TTCGGCACGA TGGTTGCACC GTCGCTCGCC
GCTGCCGAGG AACTCGATGC AACGGTCGCG AACATGCGCT TCGTGAAGCC GGTCGATGCG
GCGCTCGTGC GCGAGCTGGC CGAAACGCAC GACTACCTCG TCACGGTCGA GGAAGGCTGC
GTGATGGGTG GCGCGGGCTC GGCCTGCGTG GAAGCCCTGA TGGAGAGTGG GGTTATCCGA
CCCGTACTAC AATTGGGCCT CCCTGACCAG TTCGTCGACC ACGGCGACCA CGCGAAGCTG
CTGGCGCAAT GCGGCCTCGA CGGCGCGGGC ATCGCGAAGT CGATTCGCGA ACGCTTCCTG
AGCCCGGCGG CCGATGTCGC CGGCCACGCG AAGCGCGTCG CATAA
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| Protein sequence | MYDLLKTIDD PADLRRLDRR QLQPLADELR AFVLDSVSKT GGHLSSNLGT VELTIALHYV
FNTPNDRIVW DVGHQTYPHK ILTGRRDQMH SLRQYDGISG FPRRSESEYD TFGTAHSSTS
ISAALGMAIG SQLNGDDRFS IAVIGDGAMT AGMAFEAMNN AGVSEDAKLL VILNDNDMSI
SPPVGALNRH LARLMSGRFY AAARAGVERV LSVAPPVLEL ARKLEEHAKG MVVPATLFEE
FGFNYIGPID GHDLDSLIPT LQNIRELRGP QFLHVVTKKG QGYKLAEADP VLYHGPGKFN
PAEGIKPSTT PAKKTYTQVF GEWLCDEAER DTRVVGITPA MREGSGMVEF EKRFKDRYYD
VGIAEQHAVT FAGGLATEGL KPVVAIYSTF LQRAYDQLIH DVALQNLPVV FAIDRAGLVG
ADGATHAGAY DLAFMRCIPN MTIMAASDEN ECRQMLHTAL QQPNPTAVRY PRGAGTGVAT
VKEFTEIPLG KGEVRRRTSQ PEGKRVAILA FGTMVAPSLA AAEELDATVA NMRFVKPVDA
ALVRELAETH DYLVTVEEGC VMGGAGSACV EALMESGVIR PVLQLGLPDQ FVDHGDHAKL
LAQCGLDGAG IAKSIRERFL SPAADVAGHA KRVA
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