| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3632 |
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| Symbol | |
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| ID | 6126466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 525534 |
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| End bp | 528677 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641650739 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001777274 |
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| Protein GI | 170736014 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.840793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TCTTTATCCG ACGCCCGGTG TTTGCGTGGG TGATCGCGCT CTTCATCATC
CTGACGGGGC TGATCGCGAT CCCGCAACTG CCGGTCGCGC GCTACCCGTC GGTCGCGCCG
CCGTCTGTCA CGATCACCGC GAGCTACCCG GGCGCCACGC CGCAGACGAT GAACGACGGC
GTGCTGAGCC TCATCGAGCG CGAATTATCC GGCGTCAAGA ACCTGCTGTA CTTCGAATCG
TCGGCCGATA CCTCGGGCCA GGCACAGATC ACCGTGACGT TCAAGCCCGG CACTAATCCG
GAGATGGCGC AGGTCGACGT GCAGAACAAG ATCAAGTCGG TCGAGCCGCG CCTGCCCGCC
GCCGTGCGTC AGAACGGACT AATCGTCGAA TCCGCGTCGT CAGGGTTCCT GATGATCGTC
AGCCTGCGCT CCGACAACGG CCGCTTCGAC GAAGGCGCGC TCGCCGACTA CATGGCGCGC
AGCGTCTCCG AGGAACTGCG GCGCATCGAC GGCGTCGGCC GTGTGCTGCA GTTCGGTTCG
GAGCGCGCGA TGCGCATCTG GGTCGATCCG CAGAAGCTGA TCAATTTCGG CCTGTCGATG
AGCGACCTGA CGACCGCGAT CGGGCAGCAG AACGTGCAGA TCGCACCGGG CAGCCTCGGT
GCGCTGCCCG CGCTGCCGGG CCAGCGCGTG ACCGTGCCGC TCACCGCGCA AGGTCAGCTC
ACCACACCGG AAGCGTTCGC GAAGGTCGTG CTGCGCGCGA ATGCGGACGG CTCGAAGGTC
GTGCTCGGCG ACGTCGCCCG CGTCGAACTC GGCTCGCAGA ACTACACGTT CGTGAGCCGC
GAGAACAACA AGCCGGCCAC CCTCGCCGGC GTGCAACTCG CGCCGGGTGC CAACGCGGTG
AAGACCGCGG ACGCGATCCG CGCCCGCATG GCCGAACTGA GCAAGTCGAT GCCGTCGGGC
ATGAGCTACT CGATCCCGCT CGACACGTCG CCGTTCGTGA AGATCTCGAT CGAGAAAGTG
CTGCACACGC TGCTCGAGGC GATGGTGCTC GTGTTCCTCG TGATGTACCT GTTCCTGCAG
AACGTGCGCT ATACGCTGAT CCCGGCCATC GTCGCGCCGG TCGCGATGCT CGGCACGTTC
ACGGTGATGC TGCTGACCGG CTTCTCGATC AACGTGCTGA CGATGTTCGG CATGGTGCTC
GCGATCGGCA TCATCGTCGA CGATGCGATC GTCGTCGTCG AGAACGTCGA ACGCCTGATG
GCCGAGGAAG GACTGTCGCC GAAGGACGCG ACGTCGAAGG CGATGAAGGA GATCACCGGC
GCGATCATCG GCGTCACGCT GGTGCTGACC GCGGTGTTCC TGCCGATGGC GATGGCGAGC
GGCTCGGTCG GCGTGATCTA CAAGCAGTTC ACGCTGTCGA TGGCCGTGTC GATCCTGTTC
TCCGCGCTGC TCGCGCTGAC GCTCACGCCG GCCCTGTGCG CGACGATGCT CAAGCCGATC
GCAGCGGGTC ATCACGAGAA GCGCGGCTTC TTCGGCTGGT TCAACCGCCG CTTCGATCGC
CTGACGAAAT GGTACGAGAC GCGCGTCGGC CGCCTCGTCG GTCGCACGGG CCGCGTGATG
CTGGTGTTCG TCGCGATTTC GGGTGCACTG GTGCTCGGTT TCCGCAGCCT GCCGTCGTCG
TTCCTGCCGG ACGAAGACCA GGGCTACTTC ATCACCAGCT TTCTGTTGCC CGCCGACGCT
ACCGCCGAGC GTACGCACGA CGTGGTCAAG ACGCTGGAGA AGCATCTTGC TTCGCGTCCG
GCAATCCAGT CGAGCATTTC CGTGATCGGC TACGGCTTCT CGGGCCAGGG CTCGAACGCG
GCGATCAACT GGTCGGTGAT GAAGGACTGG AAAAACCGTG GCGGCGCGTC GACGATCGAG
GAAGGCATGC TCGCGCAGCA GGCGATGGCC GGCGTGACCG AAGGCACGGT GATGAGCCTG
CTGCCGCCGG CGATCGACGA ACTCGGCAAC AGCTCGGGCT TCTCGATGCG TCTGGAAGAC
CGCGCCAACC AGGGCGCGGC GGCGCTCAAG GCAGCGGAAG TCAAGCTGCT CGAACTCGCC
GCGCAAAGCA AGGTCGTGAC CGGCGTGTAC CCCGACAGCC TGCCGGCCGG CACCAGCATC
CGCCTCGAGA TCGATCGCGC GAAGGCGCAG GCGCTCGGCG TGTCGTTCAC GACGCTCAGC
GACACGCTGT CGACCGCGAT GGGTTCGACC TACGTGAACG ACTTCCCGAA CGCAGGCCGC
ATGCAGCAGG TGATCATCCA GGCCGACGCG CCGGCACGCA TGCAGATCGA CAACGTGATG
AAGCTGTACG TGCGCAACGC GGCCGGCGGC ATGGTGCCGC TGTCCGAGGT GGTGCGCCCC
GTGTGGACCG ACACGCCGCT GCAGATGGTG CGCTTCAAGG GCTATCCGTC CGCGCGTATC
GCCGGCAACG CGGCGCCCGG CCAGTCGAGC GGCGCGGCGA TGGCCGAGAT GGAACGGCTC
GCCGCGCAAC TGCCGCCGGG CTTCGCGGTC GAGTGGACCG GCCAGTCGCT ACAGGAACGC
CAGTCGGCGT CGCAGGCGCC GATGCTGATG GTGCTGTCGA TGATCGTCGT GTTCCTGGTG
CTCGCCGCGC TGTACGAAAG CTGGTCGATC CCGCTGTCGG TGATGCTCGT GGTGCCGCTC
GGCCTGATCG GCGCGATCGG TGCGGTGCTG TTGCGCGGGA TGCCGAACGA CGTGTTCTTC
AAAGTCGGGA TGATCACCGT GATCGGCCTG TCCGCGAAGA ACGCGATCCT GATCGTCGAG
TTCGCGAAGC AGTTGCGCGA GGAAGGCAAG GGCTTGATCG AAGCGGCCGT GCAGGCGTCG
AAGCTGCGCC TGCGCCCGAT CCTGATGACC TCGCTCGCGT TCGGCCTCGG CGTCGTGCCG
CTGATGATCG CGACCGGCGC CAGCGCCGAA ACGCAGCACG CGATCGGCAC TGGCGTGTTC
GGCGGCATGG TGACCGCCAC GGTGCTGGCC ATTTTCTTCG TCCCTGTTTT CTTTGTGTTC
GTGATGAGTA TCCAGGAGCG TATCGGCGCA TGGCGGGCTT CCCGCAAGCA GCCGGCTTCC
CCGACTCACG AACAGGAAGG TTGA
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| Protein sequence | MAEFFIRRPV FAWVIALFII LTGLIAIPQL PVARYPSVAP PSVTITASYP GATPQTMNDG
VLSLIERELS GVKNLLYFES SADTSGQAQI TVTFKPGTNP EMAQVDVQNK IKSVEPRLPA
AVRQNGLIVE SASSGFLMIV SLRSDNGRFD EGALADYMAR SVSEELRRID GVGRVLQFGS
ERAMRIWVDP QKLINFGLSM SDLTTAIGQQ NVQIAPGSLG ALPALPGQRV TVPLTAQGQL
TTPEAFAKVV LRANADGSKV VLGDVARVEL GSQNYTFVSR ENNKPATLAG VQLAPGANAV
KTADAIRARM AELSKSMPSG MSYSIPLDTS PFVKISIEKV LHTLLEAMVL VFLVMYLFLQ
NVRYTLIPAI VAPVAMLGTF TVMLLTGFSI NVLTMFGMVL AIGIIVDDAI VVVENVERLM
AEEGLSPKDA TSKAMKEITG AIIGVTLVLT AVFLPMAMAS GSVGVIYKQF TLSMAVSILF
SALLALTLTP ALCATMLKPI AAGHHEKRGF FGWFNRRFDR LTKWYETRVG RLVGRTGRVM
LVFVAISGAL VLGFRSLPSS FLPDEDQGYF ITSFLLPADA TAERTHDVVK TLEKHLASRP
AIQSSISVIG YGFSGQGSNA AINWSVMKDW KNRGGASTIE EGMLAQQAMA GVTEGTVMSL
LPPAIDELGN SSGFSMRLED RANQGAAALK AAEVKLLELA AQSKVVTGVY PDSLPAGTSI
RLEIDRAKAQ ALGVSFTTLS DTLSTAMGST YVNDFPNAGR MQQVIIQADA PARMQIDNVM
KLYVRNAAGG MVPLSEVVRP VWTDTPLQMV RFKGYPSARI AGNAAPGQSS GAAMAEMERL
AAQLPPGFAV EWTGQSLQER QSASQAPMLM VLSMIVVFLV LAALYESWSI PLSVMLVVPL
GLIGAIGAVL LRGMPNDVFF KVGMITVIGL SAKNAILIVE FAKQLREEGK GLIEAAVQAS
KLRLRPILMT SLAFGLGVVP LMIATGASAE TQHAIGTGVF GGMVTATVLA IFFVPVFFVF
VMSIQERIGA WRASRKQPAS PTHEQEG
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