| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3592 |
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| Symbol | sdhA |
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| ID | 6126426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 476914 |
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| End bp | 478689 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641650699 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001777234 |
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| Protein GI | 170735974 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.322313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA TCAAAACTTC CCTCCCGCGC CGCAAGTTCG ACGTCGTGAT CGTCGGCGCA
GGCGGCTCCG GCTTGCGCGC AGCGCTGCAA CTGTCGCGCG CGGGCCTGTC GGTCGGCGTG
CTGTCGAAGG TGTTCCCGAC GCGTTCGCAC ACGGTGGCCG CGCAGGGCGG TATCGGCGCG
TCGCTCGGCA ACATGAGCGA AGACAACTGG CACTACCACT TCTACGACAC GATCAAGGGC
TCCGACTGGC TCGGCGACCA GGATGCGATC GAGTTCATGT GCCGTGAAGC GCCGAACGTC
GTGTACGAAC TCGAGCACTT CGGCATGCCG TTCGACCGCA ACGCGGACGG CACGATCTAC
CAGCGCCCGT TCGGCGGCCA TACCGCGAAC TACGGCGAGA AGCCGGTCCA GCGCGCTTGC
GCGGCCGCCG ACCGTACCGG TCACGCGCTG CTGCACACGC TGTACCAGCA GAACGTCGAA
GCGAAGACGC AGTTCTTCGT CGAATGGATG GCGCTCGACC TGATCCGCGA CGCGGACGGC
GACGTACTCG GCGTGACGGC CCTCGAGATG GAGACGGGCG ACGTCTACAT CATGGAAGGC
AAGACCACGC TGTTCGCGAC GGGCGGCGCA GGCCGGATCT TCGCGGCATC GACGAACGCG
TTCATCAACA CCGGCGACGG CCTCGGCATG GCGGCGCGCT CGGGCATCGC GTTGCAGGAC
ATGGAGTTCT GGCAGTTCCA CCCGACCGGC GTGGCCGGCG CGGGCGTGCT GATCACCGAA
GGCGTGCGCG GCGAAGGCGG TATCCTGCGC AACGCGAACG GCGAGCGCTT CATGGAGCGC
TACGCGCCGA CGCTGAAGGA TCTGGCGCCG CGTGACTTCG TGTCGCGTTC GATGGACCAG
GAAATCAAGG AAGGTCGCGG CGTCGGTCCG AACAAGGATC ACGTGCTGCT CGACCTGTCG
CACATCGGCG CCGAGACGAT CATGAAGCGT CTGCCGTCGA TCCGCGAAAT CGCGCTGAAG
TTCGCGAACG TCGACGCGAT CAAGGAACCG ATCCCGGTCG TCCCGACGAT CCACTACCAG
ATGGGCGGCA TCCCGACCAA CATCCACGGT CAGGTCGTCG GCACGTCGCG CGATCACAAG
GAACCGGTCA ACGGCTTCTA CGCAGTGGGC GAATGCTCGT GCGTGTCGGT GCACGGCGCG
AATCGTCTGG GCACGAACTC GCTGCTGGAC CTCGTGGTGT TCGGCCGTGC GGCCGGCAAC
CACATCGTCG AGCACGTGAA GAACCAGAAG GAACACAAGC CGCTGCCGGC TGACGCAGGC
GAATTCTCGC TGGCGCGCCT GGCGAAGCTC GAGAAGTCGA GCTCGGGCGA GTACACGCAG
GACGTCGCGA ACGACATCCG CGCGACGATG CAGAAGCATG CAGGCGTGTT CCGCACGTCG
GCGCTGCTGA AGGAAGGCGT CGCTCAGATG GCCGACCTGA AGGCGCGCGT GGAAAACATC
CACCTGAAGG ACAAGTCGAA GGTGTTCAAC ACCGCGCGCG TCGAAGCGCT CGAGCTGGAG
AACCTGATCG AAGTGGCTCG CGCCACGATG GTGTCGGCCG AAGCGCGCAA GGAAAGCCGC
GGTGCACACG CACACAGCGA CTACGAACAC CGCGACGACG ACAACTGGCT GCGCCACACG
CTGTGGTACA GCGAAGGCGA TCGCCTCGAC TACAAGCCGG TTCAAATGAA GCCGCTGACG
GTCGAATCCG TGCCGCCGAA GCCGCGCACG TTCTAA
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| Protein sequence | MAAIKTSLPR RKFDVVIVGA GGSGLRAALQ LSRAGLSVGV LSKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPNV VYELEHFGMP FDRNADGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVE AKTQFFVEWM ALDLIRDADG
DVLGVTALEM ETGDVYIMEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARSGIALQD
MEFWQFHPTG VAGAGVLITE GVRGEGGILR NANGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDAIKEP IPVVPTIHYQ
MGGIPTNIHG QVVGTSRDHK EPVNGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN
HIVEHVKNQK EHKPLPADAG EFSLARLAKL EKSSSGEYTQ DVANDIRATM QKHAGVFRTS
ALLKEGVAQM ADLKARVENI HLKDKSKVFN TARVEALELE NLIEVARATM VSAEARKESR
GAHAHSDYEH RDDDNWLRHT LWYSEGDRLD YKPVQMKPLT VESVPPKPRT F
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