Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3420 |
Symbol | |
ID | 6126153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 282951 |
End bp | 285047 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641650528 |
Product | polysaccharide deacetylase |
Protein accession | YP_001777063 |
Protein GI | 170735803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCAAT CCAGACGGAC CTTCATGTGC GGATGCCTCG GCACGTTTGC CGCCTGTTCG CTGTTTCCGG GCGTGACCAA CGCCAAGATG ATCGATCTGC TGCCGCCGTC CGATCCGGCC GACGGCAAGA CGTTTCGCGT GATCTGCATG CACGACGTGC GCGACAACCT GATGGCGTCG TTCTCGTCGC CGACCGCGAT CATCGATCCG TTCGCGGTCG ACACCGGCAC ACTCACCGCG ATCTTCTCGT GGCTGCAGAC CAACAACTAC CACACCATCA CGGTCAAGCA GATCGAAGAG TCGCGCCGCG GCGGCAAGCC GCTGCCGCCG CGCTCGGTGC TGCTCACGTT CGACGACGGC TTTCGCAGCC ACTACACGAA AGTGCTGCCG CTGCTCGAGC GCTTCAAGTA TCCGGCCGTG ATGGGCCTCG TCACCGCGTG GATCGACACG CCGCCGGATA CGCCGATCCG CATCAGCGAC AAGGTGCAGG TGCCGCGCGA CTACTTCCTG TCGTGGGACG AGGTGAAGAA GCTCGGCCAG TCGGAATTCG TCGAACTCGG CTGCCACACC CACAATCTCC ATCATGGCGC GGTCGCGAAT CCGCAAGGCA ACGAGTTGCC GGCGACCACG TCGCATCTGT ACCTGCAAGA CCAGAAGCGC TACGAGACCG ACGCCGAGTT CCACGCACGC GTGCACGACG ACCTGCAGAC GTGCGTGCGG CAGATCCGCG AACGCACCGG TATCGTCGCG CGCTCGATGG TGTGGCCGTA CGGCGCGGAA AACCAGCCCG TGCGCAATAT CTCGACGTCG CTCGGCATGG ACATCCAGTT CAGCCTCGAT GCCGGCCCGA ATACGCCGGA CGTGCCGCTC GACCGGCTGA GACGGATCCT GATGATGTAC GACGTCGACA TCGGCGGGTT CGAGCGCTCG ATGCGCGAAC CGGCGTCGAA CCGCGGCGAC GTCGACGTGC CCGAGCGCAC CGTGCAGGTG GATCTCGACC AGGTCTACGA TCCCGATCCC GCACGGCAGG AAGCGAATCT CGGCAAGCTG ATCGAGCGTA TCTACCGAAT GCAGCCGAAA TCGGTGTACC TGCAGGCGTT CGCGGACCCG AAGGGCACGG GCGTGGCCGA AGCCGTGTAT TTCCCGAACC GGCACCTGCC GATGCGTTCC GACCTGTTCT CGCGTGCCGC GTGGCAACTC AATACGCGTG CCAACGTACA GGTGTACGCG TGGATGCCGG TGCTCGCGTT CCGGCCGCCC GCCGACAAGC TCCGCTCGCT CCAGGCCGTG AGCGCGTTCG GCGGTGCGCC GGCTAGAGAG AACGGCACGC GCGTGTTCCG GCTGAGTCCG TTCGATCCCG ATGCGCGGCT GATGATCCAG CAGGTCTACG AGGATCTCAG CAAGCACGCG TCGTTCAGCG GGCTCCTGTT CAGCGACGAC GCCGTGCTCG ACGACTACGA GGACGCAAGC CGGCATGCGC TGCGCGTGTA TTCGCAATGG GGGCTGCCGG CCGACGTCGG CAAGATCCGC GAGAACCCCG ACCTGATGAA GCGCTGGACG CGCCAGAAGA CGCGCTACCT GATCGACATG ACCCGGCAGC TCGAACAGAT CGTGCTGGCC CATCAAAACG TCGGCGACGT GCTGACCGCC CGCAACATCT TCGCGATGCC GGTGCTCAAG CCCGAGTCGG AAGCGTGGTT CGCGCAGAAC TACGACGATT TCCTCGCCGC CTACGACTAC GTCGCGCTGA TGGCGATGCC GTACATGGAG CAGGCGAAAG ACCCGGAAGG CTGGCTGGAC CAGCTCGTGA AGGCCGTACG CGCGAAGCAG CGCGGGCTGC AGCGGACCGT GTTCGAACTG CAGGCATACG ACTGGCACGG GCAGAAGGCG GTGCCGGCCA GCACGCTGCT CGCGCAGATG CGGCGGCTGC GCAGCGAGGG CGCCGTGAAT TTCGGCTACT ACCCCGACAA CTTCCTGAAC GGCCAGCCGG AACTCGACGC GATGCGCGAC GTGATGTCGC TGAAGTCGCG CCTCGACCCC ACCTCGATCA ACGCGCTCAT GCAGATGCAG CACTCGCAGG GAACCAAGAC ACCATGA
|
Protein sequence | MLQSRRTFMC GCLGTFAACS LFPGVTNAKM IDLLPPSDPA DGKTFRVICM HDVRDNLMAS FSSPTAIIDP FAVDTGTLTA IFSWLQTNNY HTITVKQIEE SRRGGKPLPP RSVLLTFDDG FRSHYTKVLP LLERFKYPAV MGLVTAWIDT PPDTPIRISD KVQVPRDYFL SWDEVKKLGQ SEFVELGCHT HNLHHGAVAN PQGNELPATT SHLYLQDQKR YETDAEFHAR VHDDLQTCVR QIRERTGIVA RSMVWPYGAE NQPVRNISTS LGMDIQFSLD AGPNTPDVPL DRLRRILMMY DVDIGGFERS MREPASNRGD VDVPERTVQV DLDQVYDPDP ARQEANLGKL IERIYRMQPK SVYLQAFADP KGTGVAEAVY FPNRHLPMRS DLFSRAAWQL NTRANVQVYA WMPVLAFRPP ADKLRSLQAV SAFGGAPARE NGTRVFRLSP FDPDARLMIQ QVYEDLSKHA SFSGLLFSDD AVLDDYEDAS RHALRVYSQW GLPADVGKIR ENPDLMKRWT RQKTRYLIDM TRQLEQIVLA HQNVGDVLTA RNIFAMPVLK PESEAWFAQN YDDFLAAYDY VALMAMPYME QAKDPEGWLD QLVKAVRAKQ RGLQRTVFEL QAYDWHGQKA VPASTLLAQM RRLRSEGAVN FGYYPDNFLN GQPELDAMRD VMSLKSRLDP TSINALMQMQ HSQGTKTP
|
| |