Gene Bcenmc03_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3420 
Symbol 
ID6126153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp282951 
End bp285047 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content65% 
IMG OID641650528 
Productpolysaccharide deacetylase 
Protein accessionYP_001777063 
Protein GI170735803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT CCAGACGGAC CTTCATGTGC GGATGCCTCG GCACGTTTGC CGCCTGTTCG 
CTGTTTCCGG GCGTGACCAA CGCCAAGATG ATCGATCTGC TGCCGCCGTC CGATCCGGCC
GACGGCAAGA CGTTTCGCGT GATCTGCATG CACGACGTGC GCGACAACCT GATGGCGTCG
TTCTCGTCGC CGACCGCGAT CATCGATCCG TTCGCGGTCG ACACCGGCAC ACTCACCGCG
ATCTTCTCGT GGCTGCAGAC CAACAACTAC CACACCATCA CGGTCAAGCA GATCGAAGAG
TCGCGCCGCG GCGGCAAGCC GCTGCCGCCG CGCTCGGTGC TGCTCACGTT CGACGACGGC
TTTCGCAGCC ACTACACGAA AGTGCTGCCG CTGCTCGAGC GCTTCAAGTA TCCGGCCGTG
ATGGGCCTCG TCACCGCGTG GATCGACACG CCGCCGGATA CGCCGATCCG CATCAGCGAC
AAGGTGCAGG TGCCGCGCGA CTACTTCCTG TCGTGGGACG AGGTGAAGAA GCTCGGCCAG
TCGGAATTCG TCGAACTCGG CTGCCACACC CACAATCTCC ATCATGGCGC GGTCGCGAAT
CCGCAAGGCA ACGAGTTGCC GGCGACCACG TCGCATCTGT ACCTGCAAGA CCAGAAGCGC
TACGAGACCG ACGCCGAGTT CCACGCACGC GTGCACGACG ACCTGCAGAC GTGCGTGCGG
CAGATCCGCG AACGCACCGG TATCGTCGCG CGCTCGATGG TGTGGCCGTA CGGCGCGGAA
AACCAGCCCG TGCGCAATAT CTCGACGTCG CTCGGCATGG ACATCCAGTT CAGCCTCGAT
GCCGGCCCGA ATACGCCGGA CGTGCCGCTC GACCGGCTGA GACGGATCCT GATGATGTAC
GACGTCGACA TCGGCGGGTT CGAGCGCTCG ATGCGCGAAC CGGCGTCGAA CCGCGGCGAC
GTCGACGTGC CCGAGCGCAC CGTGCAGGTG GATCTCGACC AGGTCTACGA TCCCGATCCC
GCACGGCAGG AAGCGAATCT CGGCAAGCTG ATCGAGCGTA TCTACCGAAT GCAGCCGAAA
TCGGTGTACC TGCAGGCGTT CGCGGACCCG AAGGGCACGG GCGTGGCCGA AGCCGTGTAT
TTCCCGAACC GGCACCTGCC GATGCGTTCC GACCTGTTCT CGCGTGCCGC GTGGCAACTC
AATACGCGTG CCAACGTACA GGTGTACGCG TGGATGCCGG TGCTCGCGTT CCGGCCGCCC
GCCGACAAGC TCCGCTCGCT CCAGGCCGTG AGCGCGTTCG GCGGTGCGCC GGCTAGAGAG
AACGGCACGC GCGTGTTCCG GCTGAGTCCG TTCGATCCCG ATGCGCGGCT GATGATCCAG
CAGGTCTACG AGGATCTCAG CAAGCACGCG TCGTTCAGCG GGCTCCTGTT CAGCGACGAC
GCCGTGCTCG ACGACTACGA GGACGCAAGC CGGCATGCGC TGCGCGTGTA TTCGCAATGG
GGGCTGCCGG CCGACGTCGG CAAGATCCGC GAGAACCCCG ACCTGATGAA GCGCTGGACG
CGCCAGAAGA CGCGCTACCT GATCGACATG ACCCGGCAGC TCGAACAGAT CGTGCTGGCC
CATCAAAACG TCGGCGACGT GCTGACCGCC CGCAACATCT TCGCGATGCC GGTGCTCAAG
CCCGAGTCGG AAGCGTGGTT CGCGCAGAAC TACGACGATT TCCTCGCCGC CTACGACTAC
GTCGCGCTGA TGGCGATGCC GTACATGGAG CAGGCGAAAG ACCCGGAAGG CTGGCTGGAC
CAGCTCGTGA AGGCCGTACG CGCGAAGCAG CGCGGGCTGC AGCGGACCGT GTTCGAACTG
CAGGCATACG ACTGGCACGG GCAGAAGGCG GTGCCGGCCA GCACGCTGCT CGCGCAGATG
CGGCGGCTGC GCAGCGAGGG CGCCGTGAAT TTCGGCTACT ACCCCGACAA CTTCCTGAAC
GGCCAGCCGG AACTCGACGC GATGCGCGAC GTGATGTCGC TGAAGTCGCG CCTCGACCCC
ACCTCGATCA ACGCGCTCAT GCAGATGCAG CACTCGCAGG GAACCAAGAC ACCATGA
 
Protein sequence
MLQSRRTFMC GCLGTFAACS LFPGVTNAKM IDLLPPSDPA DGKTFRVICM HDVRDNLMAS 
FSSPTAIIDP FAVDTGTLTA IFSWLQTNNY HTITVKQIEE SRRGGKPLPP RSVLLTFDDG
FRSHYTKVLP LLERFKYPAV MGLVTAWIDT PPDTPIRISD KVQVPRDYFL SWDEVKKLGQ
SEFVELGCHT HNLHHGAVAN PQGNELPATT SHLYLQDQKR YETDAEFHAR VHDDLQTCVR
QIRERTGIVA RSMVWPYGAE NQPVRNISTS LGMDIQFSLD AGPNTPDVPL DRLRRILMMY
DVDIGGFERS MREPASNRGD VDVPERTVQV DLDQVYDPDP ARQEANLGKL IERIYRMQPK
SVYLQAFADP KGTGVAEAVY FPNRHLPMRS DLFSRAAWQL NTRANVQVYA WMPVLAFRPP
ADKLRSLQAV SAFGGAPARE NGTRVFRLSP FDPDARLMIQ QVYEDLSKHA SFSGLLFSDD
AVLDDYEDAS RHALRVYSQW GLPADVGKIR ENPDLMKRWT RQKTRYLIDM TRQLEQIVLA
HQNVGDVLTA RNIFAMPVLK PESEAWFAQN YDDFLAAYDY VALMAMPYME QAKDPEGWLD
QLVKAVRAKQ RGLQRTVFEL QAYDWHGQKA VPASTLLAQM RRLRSEGAVN FGYYPDNFLN
GQPELDAMRD VMSLKSRLDP TSINALMQMQ HSQGTKTP