Gene Bcenmc03_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3359 
Symbol 
ID6126094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp210482 
End bp211666 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID641650469 
Productporin 
Protein accessionYP_001777004 
Protein GI170735744 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00120299 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC CCGTCAACCG TTATGCAATC CTGATTTTAT CGGCCGCGTC GCTCGGCACG 
ACCGCCCATG CGCAGAGCAG CGTCACGCTG TACGGCGTGG TCGACGATTC GCTCGCGTAC
GTGAACAACC AGCAGGGACA CTCGAACATC TACATGCGCG ACGGCAACCT GTATGCGTCG
AAGTTCGGGC TGCGCGGCGA CGAGGATCTC GGCGGCGGCA CGCACGCGAT CTTCGACCTG
CAGGCCGGTT TCAACCTGAA TACGGGCGCG CAGGCCGCCG CCGGCACGAT GTTCAATCGC
CAGGCCTTCG TCGGCCTGCG CAACGCCAGC TACGGTACGG TCACGGCCGG TCGCCAGTAC
ACGCCCTACT TCCTGTTCGT CGGCCCGTAC GCGTCGAGCA GCTGGCTGAC GGGCGCCACC
GGCGCGCATC CGGGCGACAT CGACGGCCTC GACACCACGA TCCGCGTGAA CAATTCGGTT
ACCTATACGT CGCCGACCTT CGCGGGGCTG ACCGCGAGCG CGATGTACGC ATTCGGCGGC
ATTGCCGGCG CGACCGGCAA GGGCAACACG TTCAGCGCCG CGCTGCGCTA CGCGAACGGG
CCGATCGGGA TCGCGGCCGG CTACCTGCGG ATCAACAGCT CGGGCTCGTC CGCGGGCTTC
CTGAACCCGG CCACCGCGTC GTCGGGCAGC TTCGCGGTGT CCGTGCTGAA CCAGGGCTAC
CTGAGCGCGA AAGCGGTCGA ACAGGTGGCG GCGGCCGGCA ACTACACGCT CGGCGACCTG
ACGATGGGGC TCAACTATTC GAACGTGAAG TACCTGCCCG GCAACGGCTC GGCGTTCACC
GACACGGCCG TGTTCAACAC CTACGGCGCG CTTGCCGCAT ACCGCTTCAC GCCGACGTTC
TCGGTGGCCG GCGCATTCGC GTACACGCTC GCATCGAAGG CGAACGGCAT CGCGAGCGCG
GCCCGCTATC AACAATATTC GCTGAAGGAG TCGTACAGCC TGTCGAAACG CACGACGCTC
TATGCGCTGC AGGCGTACAC CCATTCGAGC GGCCGGACGC TCGGCGCGCA AGGCGCCGGG
CACATCGTCG ATGCGGCGCC GATCGTCGGC GATTCGCAGC AGCTCACGCC GTCGACGACG
CACGGCCAGT TCGTCGGCAT GGCCGGGATC GCCGTCACGT TCTGA
 
Protein sequence
MKAPVNRYAI LILSAASLGT TAHAQSSVTL YGVVDDSLAY VNNQQGHSNI YMRDGNLYAS 
KFGLRGDEDL GGGTHAIFDL QAGFNLNTGA QAAAGTMFNR QAFVGLRNAS YGTVTAGRQY
TPYFLFVGPY ASSSWLTGAT GAHPGDIDGL DTTIRVNNSV TYTSPTFAGL TASAMYAFGG
IAGATGKGNT FSAALRYANG PIGIAAGYLR INSSGSSAGF LNPATASSGS FAVSVLNQGY
LSAKAVEQVA AAGNYTLGDL TMGLNYSNVK YLPGNGSAFT DTAVFNTYGA LAAYRFTPTF
SVAGAFAYTL ASKANGIASA ARYQQYSLKE SYSLSKRTTL YALQAYTHSS GRTLGAQGAG
HIVDAAPIVG DSQQLTPSTT HGQFVGMAGI AVTF