Gene Bcenmc03_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3357 
Symbol 
ID6126092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp206635 
End bp207906 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID641650467 
Productmajor facilitator transporter 
Protein accessionYP_001777002 
Protein GI170735742 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0473601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACAG TCAAGGCGTT GCGCTGGTGG ATCATCGTGC TCGTGTGTCT CGGCACGATC 
CTCAACTACC TCGCACGGAA TTCCCTCGCG GTGCTCGCGC CCGAGCTCAA GCAGGTGTTC
GCGATCTCGA CGCAGCAGTA CTCGTACATC GTCGGCGCGT TCCAGATCGG CTACACGATC
ATGCAGCCGG TATGCGGGTT CATCGTCGAC CTGATCGGGT TGCGGCTCGG GTTCGCGCTG
TTCGCGATGC TGTGGTCGGT GGTCGGCGTC GCGCATGGCT TCGCGTCGGG CTGGCTGTCG
CTCGGCATCC TGCGCGGCTT TCTGGGCCTG TTCGAGGCCG CCGCGATTCC GTCAGGGATG
AAGGCCGTCG CCGAATGGTT TCCCGATCGC GAGAAATCCG TCGCGGTCGG CTACTTCAAC
GCGGGCACGT CGCTCGGCGC CGCGATCGCG CCGCCGCTCG TCGTGTTCCT GTCGATGCGG
TTCGGCTGGC AGGCCGCGTT CATGGCCACC GGCGCGCTCG GGTTCGTCTG GGCCGCCCTC
TGGTACACGC AGTACCGGTC GCCGGCCGAC CATCCGCGCA TCACGCCGCA GGAGCGCACG
TTGATCCGCG ACGGCCAGGC CACGATGCCG CCCGTGTCGA AGCGCCGTAT CCGCGACGTC
GTCACCGCGC GGCGCTTCTG GGCGATCGCG CTGCCGCGCT TCTTCGCGGA ACCCGCGTGG
CAAACCTTCA GCTTCTGGAT TCCGCTGTAC CTCGCCACCG AGCGCCACAT GCCGCTCACC
CAGATCGCGG TGTTCGCGTG GATGCCGTTC CTCGCGGCCG ACGCCGGCGG CATCGCGGGC
GGCTACCTGT CGCCGTACCT CGCCAATCGC TTCAAGCTGC CGCTCGTGTG GTCGCGCGTC
GCGGGCGTCG CGCTCGGCGC GGTGCTGATG CTCGGGCCCG CGATGATCGG GCTCGTGTCG
TCGCCGTACA CGGCGATTGC GCTGTTCTGC GTCGGCGGCT TCGCGCACCA GATGATCTCC
GCGCTCGTCA ACACGCTGTC GGCCGACGTG TTCGACCCCG AGGAAGTCGG CACCGCGAGC
GGCTTCGCCG GGATGGCCGC GTGGATCGGC GGCCTCGGCT TCTCGCTGCT GGTCGGCGCG
CTCGCCGACA AGATCGGCTA TGCGCCGCTG TTCGCATGTC TCGGCCTGTT CGACATCATC
GGCGTCACGC TGCTCGCGGT GCTGATCCGC GGACAATCGA AGCAGGAACG CCTGCTCGCG
CAGCACGCCT GA
 
Protein sequence
MKTVKALRWW IIVLVCLGTI LNYLARNSLA VLAPELKQVF AISTQQYSYI VGAFQIGYTI 
MQPVCGFIVD LIGLRLGFAL FAMLWSVVGV AHGFASGWLS LGILRGFLGL FEAAAIPSGM
KAVAEWFPDR EKSVAVGYFN AGTSLGAAIA PPLVVFLSMR FGWQAAFMAT GALGFVWAAL
WYTQYRSPAD HPRITPQERT LIRDGQATMP PVSKRRIRDV VTARRFWAIA LPRFFAEPAW
QTFSFWIPLY LATERHMPLT QIAVFAWMPF LAADAGGIAG GYLSPYLANR FKLPLVWSRV
AGVALGAVLM LGPAMIGLVS SPYTAIALFC VGGFAHQMIS ALVNTLSADV FDPEEVGTAS
GFAGMAAWIG GLGFSLLVGA LADKIGYAPL FACLGLFDII GVTLLAVLIR GQSKQERLLA
QHA